| Protein: | CE04160 |
| Organism: | Caenorhabditis elegans |
| Length: | 432 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04160.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..2] | [432..107] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MSELENLKDQ IKRIDEMIVQ ETNEETRVEY EQTKMDLEEL VSLMEEDEEK TQKSPDDDEI 60
61 DEQDEDSAEI DDTSTDSLLG SRCMVPYDSD RSLSLHTAII MEIESSKRVR VLFSHPTCSA 120
121 MKPCTHFLSS SCKFNENCRF SH
|
| Detection Method: |  |
| Confidence: | 11.09691 |
| Match: | 1g5vA |
| Description: | Survival motor neuron protein 1, smn |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.346102840207765 | bayes_pls_golite062009 |
|
Region A: Residues: [143-432] |
1 11 21 31 41 51
| | | | | |
1 GYSVELERIQ DYQVPDYSFI VEEGLVLVKG MSDIWELGRI SAIDTQNVAV KVLKSGIEIS 60
61 SKRKDLVPIG EVEEPTKQEQ SSESWKELKQ ETLGNVTVGD LGKWNGGGVG MKLMMKMGYK 120
121 VGEGLGKRSD GIVHAIQARI CKKNASLDEV MTRKRKFIDR KEVQKNKNIK KLKTTDESEM 180
181 DIFAFINRKL EKKNERTFAD VRKETQEMAG YSSKTLGAKN LDLELELKQL KEKQNKLKSG 240
241 IQRNRGDKNT VSKMSESLRE VDAKIESINR KLNRIQSEVS SRNSKRKNEF
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
