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Protein Overview: CE04160

General Information:
Name(s) found: CE04160 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00016383 locus:zgpa-1 status:Confirmed UniProt:Q18418 protein_id:CCD66580.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: lipid storage [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELENLKDQ IKRIDEMIVQ ETNEETRVEY EQTKMDLEEL VSLMEEDEEK TQKSPDDDEI  60
   61 DEQDEDSAEI DDTSTDSLLG SRCMVPYDSD RSLSLHTAII MEIESSKRVR VLFSHPTCSA 120
  121 MKPCTHFLSS SCKFNENCRF SHGYSVELER IQDYQVPDYS FIVEEGLVLV KGMSDIWELG 180
  181 RISAIDTQNV AVKVLKSGIE ISSKRKDLVP IGEVEEPTKQ EQSSESWKEL KQETLGNVTV 240
  241 GDLGKWNGGG VGMKLMMKMG YKVGEGLGKR SDGIVHAIQA RICKKNASLD EVMTRKRKFI 300
  301 DRKEVQKNKN IKKLKTTDES EMDIFAFINR KLEKKNERTF ADVRKETQEM AGYSSKTLGA 360
  361 KNLDLELELK QLKEKQNKLK SGIQRNRGDK NTVSKMSESL REVDAKIESI NRKLNRIQSE 420
  421 VSSRNSKRKN EF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 11.09691 Survival motor neuron protein 1, smn
    2 View Details [143..432] PSI-BLAST 20.522879 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.346102840207765 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle