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Protein Overview: tag-52

General Information:
Name(s) found: tag-52 / CE03899 [WormBase]
Description(s) found:
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  • WBGene00006431 locus:tag-52 Putative protein tag-52 status:Partially_confirmed UniProt:Q11100 protein_id:CCD62375.1 [WormBase]
  • pir||T34079 hypothetical protein C02F12.4 - Caenorhabditis elegans [NCBI NR]
  • gi|2496851|sp|Q11100.1|TAG52_CAEEL RecName: Full=Putative protein tag-52 [NCBI NR]
  • gi|17550048|ref|NP_508633.1| Temporarily Assigned Gene name family member (tag-52) [Caenorhabditis elegans] [NCBI NR]
  • gi|13775312|gb|AAK39134.1| Temporarily assigned gene name protein 52, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • (Q11100) Hypothetical protein C02F12.4 [Swiss-Prot]
  • Putative protein tag-52 OS=Caenorhabditis elegans GN=tag-52 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed SW:Q11100 protein_id:AAK39134.1 [wormpep150.fasta]
  • 03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed SW:Q11100 protein_id:AAK39134.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • frabin actin binding protein like (76.8 kD) (XE294) [Caenorhabditis elegans]gi|13775312|gb|AAK39134.1| Temporarily assigned gene name protein 52 [Caenorhabditis elegans]gi|7495210|pir||T34079 hypothetical protein C02F12.4 - Caenorhabditis elegansgi|249 [nrdb_11152004_Chlamydomonas]
  • guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed SW:Q11100 protein_id:AAK39134.1 [wormpep115.fasta.reversed]
  • CE03899 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed SW:Q11100 protein_id:AAK39134.1 [wormpep80.hongbin]
  • CE03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed UniProt:TAG52_CAEEL protein_id:AAK39134.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed UniProt:TAG52_CAEEL protein_id:AAK39134.1| [wormORF-contam.fasta]
  • Putative protein tag-52 [nr-271106-contam.fasta]
  • Temporarily assigned gene name protein 52 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Temporarily Assigned Gene name family member (tag-52) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed UniProt:Q11100 protein_id:AAK39134.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03899 WBGene00006431 locus:tag-52 guanine-nucleotide releasing factor of the CDC24 family status:Partially_confirmed UniProt:Q11100 protein_id:CCD62375.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE03899 WBGene00006431 locus:tag-52 status:Partially_confirmed UniProt:Q11100 protein_id:CCD62375.1 Putative protein tag-52 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 665 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rho protein signal transduction [IEALink to PubMed article]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAGKEFNYY TYQSDSSQGS LQKAPDENTD YFTHKMNSYL PFDMSTLYAN QPTEKIQILQ  60
   61 EIYDTERTYV KALTIVDEIF IQQLNLWCPK SKKCFRSMFG EISAICKTHQ ILLESLQCKP 120
  121 IAEVFTKFVP FLKLYTSYAS HYPNSLKIFA KLMSRNDFRK ALTKIEEDPR VDGKKLQTYL 180
  181 IMPIQRIPRY IMLIQNLMNY STEKDDMTNL YKALSGMQGL SDQIQSCMTA YENGERLLQI 240
  241 QLNFGLDGHI LEPGRVLLKE GMLYKRELNG SANYQETVVF LFNDILLYGI KRISVMPLCK 300
  301 YEPSAILSLR HCIVQLDDIG GSIFIRCGDV GVDFTAYSLG GVTEWYNEIC DAIDNAKKLR 360
  361 DTLRKESFKQ KSLIFDKGFW QRNRDKLRNM ITADMTGNIS RVLTRKKPAP KLEESDFLRG 420
  421 QWTTSTIASN QRKRKVATLE DEEEDVFNML SSPNLSQRKR KATLQENTPS GVGWTASPRS 480
  481 SSFRKRRAST LRNKNADVTD GNNYLSHLVL NDVTMTQPYT GLNAFVGTPK SRTPTDDDYD 540
  541 SDRDYVWTDD EEFVSDDKKI PIRRVASYDE EDRRPRDFSE VRRSVASEPP RRHLAVDDIR 600
  601 KLSYQQRSLE PFNMVTEDDD EDDIIDIKVK GERPRPWWET ESAPPAIKNQ KSSIIDSIRN 660
  661 SCAIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..431] PSI-BLAST 56.39794 No description for 2pz1A was found.
    2 View Details [432..506] deduced N/A No confident structure predictions are available.
    3 View Details [507..665] MSA 2.283997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle