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Protein Overview: dgn-1

General Information:
Name(s) found: dgn-1 / CE03679 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00000961 locus:dgn-1 status:Partially_confirmed UniProt:Q22629 protein_id:CAA92012.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 584 amino acids

    Gene Ontology:
    Cellular Component: basement membrane [IDA]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: negative regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIFLVSTL LLVTTAISDT RVFIGELFEH NLGDNYTIAT GKDSGPLPSW LMVRDQTLTG  60
   61 IPTENDVGRH TVMIKSRGRK PVYLYLNVEE ETISPCGANN TFWMETYHEQ EASLANRINT 120
  121 ALAMNELELD PEIKTVRIYS FNFSLINREL EEINQEAVHG QYMAIWKVAC EDFDEALNYM 180
  181 DDFVDREDVD YDSIKLAKGF FKPGMAPKPT KEAEDPTTAE YLRTTTELIR TTRRITDNKP 240
  241 ILLNRLPSFT CTRGEMCDLR IPSETFKDAE DGDTFKMKLS VLALDNAEVW MINESNKGLI 300
  301 GVPMRTGEFN YRLEARDKAG QLASAPFQVN VKPALPTNHR VQLEMDQPTP QQMATNPSKR 360
  361 NLLVRALARS LKAPVNSFTI QEIGYKNNKT MVAFSNNSIP YKVCDEAAIN AMASKMIIKQ 420
  421 KMRTKTEFVK TMGNQFYVRT ATMIRHGNCD ETVEISTTAP TVESIQEADS QLLLICVLLF 480
  481 LLLLIAVAII IYCACIKKSG KKKSTSTEYV SKGLPVVFPD EVEENDPTHA GTPMLAREER 540
  541 PPLKVSQHEN PLYKPPPPIA SNSPRLGHAS SSSNQKLQSP FIPP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..445] PSI-BLAST 19.522879 W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography
    2 View Details [446..584] MSA 1.410975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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