| Protein: | dgn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 584 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dgn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
292.0 | [0..1] | [584..1] |
|
Region A: Residues: [1-445] |
1 11 21 31 41 51
| | | | | |
1 MRLIFLVSTL LLVTTAISDT RVFIGELFEH NLGDNYTIAT GKDSGPLPSW LMVRDQTLTG 60
61 IPTENDVGRH TVMIKSRGRK PVYLYLNVEE ETISPCGANN TFWMETYHEQ EASLANRINT 120
121 ALAMNELELD PEIKTVRIYS FNFSLINREL EEINQEAVHG QYMAIWKVAC EDFDEALNYM 180
181 DDFVDREDVD YDSIKLAKGF FKPGMAPKPT KEAEDPTTAE YLRTTTELIR TTRRITDNKP 240
241 ILLNRLPSFT CTRGEMCDLR IPSETFKDAE DGDTFKMKLS VLALDNAEVW MINESNKGLI 300
301 GVPMRTGEFN YRLEARDKAG QLASAPFQVN VKPALPTNHR VQLEMDQPTP QQMATNPSKR 360
361 NLLVRALARS LKAPVNSFTI QEIGYKNNKT MVAFSNNSIP YKVCDEAAIN AMASKMIIKQ 420
421 KMRTKTEFVK TMGNQFYVRT ATMIR
|
| Detection Method: |  |
| Confidence: | 19.522879 |
| Match: | 1q55A |
| Description: | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [446-584] |
1 11 21 31 41 51
| | | | | |
1 HGNCDETVEI STTAPTVESI QEADSQLLLI CVLLFLLLLI AVAIIIYCAC IKKSGKKKST 60
61 STEYVSKGLP VVFPDEVEEN DPTHAGTPML AREERPPLKV SQHENPLYKP PPPIASNSPR 120
121 LGHASSSSNQ KLQSPFIPP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
