YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE03637

General Information:
Name(s) found: CE03637 [WormBase]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • WBGene00011511 Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog T05H10.7 status:Partially_confirmed UniProt:Q10003 protein_id:CAA87796.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 796 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycerol metabolic process [IEALink to PubMed article]
    Molecular Function: glycerophosphodiester phosphodiesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFTRRAVSP RASFVFDRHV GTINSSLSRR PRISECVEEE EEDGGGFDLF EEMRQPIQEN  60
   61 IPMIILEEEE DDNDNLVMSV ARPVRVHFAV DVENLHAHQS VYVVGSNDVL GTWEATRAMP 120
  121 LVQDPDRFMR WKGSIVTDVH QLKFRYFIGY NLMSDQGERL IVDKWEAFLH PRSTLCLAES 180
  181 RNDECRVDRV DLFGYYAGRK CVSDGWLQYP DENQILLRLH GNALKFYKTA KERKNCRVKM 240
  241 TPLDVRFKAP PSGHISFSYG EDEEDEEEDQ NVPSNKCTHS ATHVAVLSDP RPKFYDQEDT 300
  301 GVTFNNNKDY LVFRTHCLAA EFLAFYIEIF SEERKRIGAC YALPSSLQDA SGIIHLPFIN 360
  361 SSGRPIGQVS IEYLCVRALT RLDGPQFMDQ TYCRHWKKRN ALEVGHRGAG NSYTKFAMAR 420
  421 ENTIHSLNTA AKNGADYVEF DVQLTKDRIA VIYHDFHVLV SVARRDGLAM PPPMTREQLD 480
  481 SSNLDYHELP VKDLKLSQLK LLMLDHLSFP QKKENVKKLV EAGEEEEDFK PFPTLLEALT 540
  541 KVDPDVGFNV EVKYPMMQNN GEHECDHYFE RNLFVDVILA DVMKHAGNRR IMFSSFDPDI 600
  601 CSMVATKQNK YPVLFLCVGE TQRYTPFQDQ RTSTSMTAVN FAAGADLLGV NFNSEDLLKD 660
  661 PMPVKKANEF GMVTFVWGED LDKKENINYF KKELGVDGVI YDRIGEEERR RNVFIVEREQ 720
  721 KRALLSCSGA STPQRAASPS PVSSENNNTS PPHSAKLTRN AQSDSALLEE NEDDVEHLSD 780
  781 KLNITGFQSA PMVSTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] MSA 2.080988 View MSA. No confident structure predictions are available.
    2 View Details [71..203] PSI-BLAST 33.522879 CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE)
    3 View Details [204..349] deduced N/A No confident structure predictions are available.
    4 View Details [350..717] PSI-BLAST 53.39794 Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
    5 View Details [718..796] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.322782393124324 bayes_pls_golite062009
  • hydrolase activity
    		•  0.114597543302679 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.10444517300189 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.0391669406455814 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.0229452028027644 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle