YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE03548

General Information:
Name(s) found: CE03548 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00011163 locus:chil-20 status:Partially_confirmed UniProt:Q21863 protein_id:CAA93867.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMYFLPICD NRVVGYFSSN QNSTITEDQV SKLTHAVFAF VNMTQGGNLN IINRQRFLSL  60
   61 TKIAKQQTPP VKVMISIGGD DNSNNFYKVL NSPNRRKVFL NATTSFLQIY GIDGIDLFWK 120
  121 WPGGASKTLY TKFISDLRHN LQQKNKNYIL SIVLPPPDLE GNYEAGINIT SIVNNVDFLN 180
  181 IFTMGYFGPW PNPKGMITGA TSQLFYGVNG VLGRRNYNIH HSVQSYVCKT DQSNKYNIAI 240
  241 PFYTMLWKHV QGPINPPNIE IYRNATFNGT VFGEANMSRK LVQQEGYDLS HPTFNSEIRA 300
  301 AFKYNATTET FLTFETNDTI AAKIDYVKDR ILGGVWIWGV DMDDNSNSLL SLVKFTEYCD 360
  361 SGNSTIYKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..369] PSI-BLAST 90.522879 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imaginal disc growth factor activity
    		•  3.9608908661313 bayes_pls_golite062009
  • growth factor activity
    		•  2.18932950777991 bayes_pls_golite062009
  • chitinase activity
    		•  1.96922204880842 bayes_pls_golite062009
  • receptor binding
    		•  1.89435893935497 bayes_pls_golite062009
  • binding
    		•  0.716515560526076 bayes_pls_golite062009
  • protein binding
    		•  0.434943505963081 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle