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Protein Overview: CE03498

General Information:
Name(s) found: CE03498 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010844 locus:prp-3 status:Confirmed UniProt:Q21486 protein_id:CAA88957.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 621 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLEDICDQ YLSRKKEQDK VIEAVERCLK KGYDYEKLKD RVQEAISDPQ KARKVISAVC  60
   61 DHYPQLRKRT RTDRDGEDRD RKRDRTDDRR KPDASVPAAV AEPQKPAEQS IEERLRAKEM 120
  121 MYKAQQEIEE TKRKMAIAAG TLQPKAALAQ AKTQMVAPGG KSLSLGRDEA TMLMTHSMDK 180
  181 KSRMEELKAR LARTTVMAKI DAMVGNSGAG VMAPLPEAVQ QAEKKVQQQI TKESKEPEKL 240
  241 IEYLDPRIQA RTADRRRRGF NFHEKGEFEK LANKQRAMAK LERLQNEVSS AAQSTGISSA 300
  301 VKLAMVTPTG TAKMENGVPD IEWWDMLVLD KVNYDEIPAE NDMERYSQTV SELVEHPISM 360
  361 RAPTEPLTQQ YLKVYLTTKE KKKIRRQNRK EVLKEKTEKI RLGLEKAPEP KVKISNLMRV 420
  421 LGNEAIQDPT KMEAQVRKQM AERLKKHETL NAERKLTEDQ KRAKKTKKLS EDTSTAVNVS 480
  481 VYRVKSLAHP SKKFKVETNA KQLQMSGAIM MHKAQNVIVV EGGPKQQKFY KNLMINRIKW 540
  541 SDEIIGQKKD AEKDAPGERN LCEMIWEGQV KRRNFRDFTV HTATLEKQAR EFFEKHGVAQ 600
  601 YWDLCYSTTV LLEGQDILPT A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] FFAS03 1.05 Solution structure of PWI domain in U4/U6 small nuclear ribonucleoprotein Prp3(hPrp3)
    2 View Details [95..215] MSA 2.196995 View MSA. No confident structure predictions are available.
    3 View Details [216..475] PSI-BLAST 6.39794 Heavy meromyosin subfragment
    4 View Details [476..621] FFAS03 1.27 No description for 2iygA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle