| Protein: | CE03498 |
| Organism: | Caenorhabditis elegans |
| Length: | 621 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03498.
| Description | E-value | Query Range |
Subject Range |
|
|
522.0 | [0..18] | [615..27] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MGKLEDICDQ YLSRKKEQDK VIEAVERCLK KGYDYEKLKD RVQEAISDPQ KARKVISAVC 60
61 DHYPQLRKRT RTDRDGEDRD RKRDRTDDRR KPDA
|
| Detection Method: |  |
| Confidence: | 1.05 |
| Match: | 1x4qA |
| Description: | Solution structure of PWI domain in U4/U6 small nuclear ribonucleoprotein Prp3(hPrp3) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [95-215] |
1 11 21 31 41 51
| | | | | |
1 SVPAAVAEPQ KPAEQSIEER LRAKEMMYKA QQEIEETKRK MAIAAGTLQP KAALAQAKTQ 60
61 MVAPGGKSLS LGRDEATMLM THSMDKKSRM EELKARLART TVMAKIDAMV GNSGAGVMAP 120
121 L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-475] |
1 11 21 31 41 51
| | | | | |
1 PEAVQQAEKK VQQQITKESK EPEKLIEYLD PRIQARTADR RRRGFNFHEK GEFEKLANKQ 60
61 RAMAKLERLQ NEVSSAAQST GISSAVKLAM VTPTGTAKME NGVPDIEWWD MLVLDKVNYD 120
121 EIPAENDMER YSQTVSELVE HPISMRAPTE PLTQQYLKVY LTTKEKKKIR RQNRKEVLKE 180
181 KTEKIRLGLE KAPEPKVKIS NLMRVLGNEA IQDPTKMEAQ VRKQMAERLK KHETLNAERK 240
241 LTEDQKRAKK TKKLSEDTST
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [476-621] |
1 11 21 31 41 51
| | | | | |
1 AVNVSVYRVK SLAHPSKKFK VETNAKQLQM SGAIMMHKAQ NVIVVEGGPK QQKFYKNLMI 60
61 NRIKWSDEII GQKKDAEKDA PGERNLCEMI WEGQVKRRNF RDFTVHTATL EKQAREFFEK 120
121 HGVAQYWDLC YSTTVLLEGQ DILPTA
|
| Detection Method: | |
| Confidence: | 1.27 |
| Match: | 2iygA |
| Description: | No description for 2iygA was found. |
