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Protein Overview: rpl-26

General Information:
Name(s) found: rpl-26 / CE03278 [WormBase]
Description(s) found:
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  • WBGene00004440 locus:rpl-26 60S ribosomal protein L26 status:Confirmed UniProt:Q19869 protein_id:CAA92674.1 [WormBase]
  • pir||T21486 hypothetical protein F28C6.7a - Caenorhabditis elegans [NCBI NR]
  • gi|3876357|emb|CAA92674.1| C. elegans protein F28C6.7a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2500310|sp|Q19869.1|RL26_CAEEL RecName: Full=60S ribosomal protein L26 [NCBI NR]
  • gi|17535693|ref|NP_495823.1| Ribosomal Protein, Large subunit family member (rpl-26) [Caenorhabditis elegans] [NCBI NR]
  • 60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE03278 WBGene00004440 locus:rpl-26 ribosomal protein L26 like status:Confirmed SW:Q19869 protein_id:CAA92674.1 [wormpep150.fasta]
  • 03278 WBGene00004440 locus:rpl-26 ribosomal protein L26 like status:Confirmed SW:Q19869 protein_id:CAA92674.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal Protein, Large subunit (16.1 kD) (rpl-26) [Caenorhabditis elegans]gi|3876357|emb|CAA92674.1| Hypothetical protein F28C6.7a [Caenorhabditis elegans]gi|7500062|pir||T21486 hypothetical protein F28C6.7a - Caenorhabditis elegansgi|2500310|sp|Q198 [nrdb_11152004_Chlamydomonas]
  • locus:rpl-26 ribosomal protein L26 like status:Confirmed SW:Q19869 protein_id:CAA92674.1 [wormpep115.fasta.reversed]
  • CE03278 locus:rpl-26 ribosomal protein L26 like status:Confirmed SW:Q19869 protein_id:CAA92674.1 [wormpep80.hongbin]
  • CE03278 WBGene00004440 locus:rpl-26 ribosomal protein L26 like status:Confirmed UniProt:RL26_CAEEL protein_id:CAA92674.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03278 WBGene00004440 locus:rpl-26 ribosomal protein L26 like status:Confirmed UniProt:RL26_CAEEL protein_id:CAA92674.1| [wormORF-contam.fasta]
  • Hypothetical protein F28C6.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • 60S ribosomal protein L26 [nr-271106-contam.fasta]
  • Ribosomal Protein, Large subunit family member (rpl-26) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03278 WBGene00004440 locus:rpl-26 ribosomal protein L26 like status:Confirmed UniProt:Q19869 protein_id:CAA92674.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03278 WBGene00004440 locus:rpl-26 status:Confirmed UniProt:Q19869 protein_id:CAA92674.1 60S ribosomal protein L26 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 142 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNPFVSSD SGKSRKAHFN APSHERRRIM SAPLTKELRT KHGIRAIPIR TDDEVVVMRG  60
   61 RHKGNTGRVL RCYRKKFVIH IDKITREKAN GSTVHIGIHP SKVAITKLKL DKDRRALVER 120
  121 KAAGRSRVTG ILKGKHTDET VN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 30.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle