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Protein Overview: glb-13

General Information:
Name(s) found: glb-13 / CE03233 [WormBase]
Description(s) found:
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  • WBGene00008957 locus:glb-13 globin like status:Partially_confirmed UniProt:Q19601 protein_id:CAA92164.1 [WormBase]
  • pir||T21119 hypothetical protein F19H6.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3876112|emb|CAA92164.1| C. elegans protein F19H6.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17567163|ref|NP_510079.1| GLoBin family member (glb-13) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03233 WBGene00008957 globin like status:Partially_confirmed TR:Q19601 protein_id:CAA92164.1 [wormpep150.fasta]
  • 03233 WBGene00008957 globin like status:Partially_confirmed TR:Q19601 protein_id:CAA92164.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • hemoglobin C1 polymer like (XM994) [Caenorhabditis elegans]gi|3876112|emb|CAA92164.1| Hypothetical protein F19H6.2 [Caenorhabditis elegans]gi|7499443|pir||T21119 hypothetical protein F19H6.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • globin like status:Partially_confirmed TR:Q19601 protein_id:CAA92164.1 [wormpep115.fasta.reversed]
  • CE03233 globin like status:Predicted TR:Q19601 protein_id:CAA92164.1 [wormpep80.hongbin]
  • CE03233 WBGene00008957 locus:glb-13 globin like status:Partially_confirmed UniProt:Q19601_CAEEL protein_id:CAA92164.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03233 WBGene00008957 locus:glb-13 globin like status:Partially_confirmed UniProt:Q19601_CAEEL protein_id:CAA92164.1| [wormORF-contam.fasta]
  • Hypothetical protein F19H6.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F19H6.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03233 WBGene00008957 locus:glb-13 globin like status:Partially_confirmed UniProt:Q19601 protein_id:CAA92164.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCRNVYPIP KRSKSKKINF RCEPNEDEAT SMTNAAAAAG GAKSKCKHFL TRRERILLEQ  60
   61 SWRKTRKTGA DHIGSKIFFM VLTAQPDIKA IFGLEKIPTG RLKYDPRFRQ HALVYTKTLD 120
  121 FVIRNLDYPG KLEVYFENLG KRHVAMQGRG FEPGYWETFA ECMTQAAVEW EANRQRPTLG 180
  181 AWRNLISCII SFMRRGFDEE NGKKKQYSYN VQGFSSNRAR RSISPYAPGV H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 42.69897 Hemoglobin, beta-chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle