YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: nhr-25

General Information:
Name(s) found: nhr-25 / CE03191 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00003623 locus:nhr-25 Nuclear hormone receptor family member nhr-25 status:Confirmed UniProt:Q19345 protein_id:CAA91028.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 572 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    Biological Process: molting cycle, protein-based cuticle [IMPLink to PubMed article]
    positive regulation of vulval development [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    gonad development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    oviposition [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    steroid hormone receptor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDVERMVLR PNHEGEMCPV CGDRVSGYHY GLLTCESCKG FFKRTVQNKK QYQCSAEANC  60
   61 HVDRTCRKRC PSCRFQKCLT MGMKMEAVRA DRMRGGRNKF GSFYKKDRAH RMQRNAMRVS 120
  121 TVQVPAVLGA QSQAQTFYQP PEHQVSSSTT DQNNQINYFD QTKIKTEYIK TEYDAHLQSP 180
  181 TLSSSTNQQL SVSDFIMRPG YLVDPQDSLA VLLGSTIDDP LLRHTFPAAY QLNEVKQEPF 240
  241 DYSEQFIHHS LHDYPTYTSN TTNYATMMPM TTVSSTQSLV TSTSSTTTGR MTEASSTSPI 300
  301 LPLCPAPTEK TVDHFYNSSI AEMCKTLPDD AQIARIFTSV KGTSKPEKHA FSIQVAEENL 360
  361 KDIVIWAKND QLFSKLSLDD QMILLQTSWT TVHIVDITNA MVHGNLLSQY KMSNGDEVPV 420
  421 GLVALLGNQT FVSSWNDVVI RLRNMGFTNF DYCAFRFLAL FDQSMDSFPA VSTARSRVLQ 480
  481 SWREVRCTTA FLEIFEQIRR LAYDSLRYLW NLHSNCPTNW EQFFPEASLV LEMIRTTVNR 540
  541 SASSSVTAIT QVPAIQLPTP QATYTAVPYM AS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 25.39794 Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
    2 View Details [164..230] deduced N/A No confident structure predictions are available.
    3 View Details [231..572] PSI-BLAST 30.69897 hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle