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Protein Overview: rsd-3

General Information:
Name(s) found: rsd-3 / CE03062 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004682 locus:rsd-3 status:Confirmed UniProt:Q18453 protein_id:CAA91751.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: phospholipid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLLAGITT SIKSTANAIT KNEYVRKVTE SMNDAIMNYP KAMMDVREAT NEDPWGPTGP  60
   61 QMKKICEYTR SRYMEDFYNV YTPLFQRMLE NNKDAWRRVY KSLILLDYLL KNGSERFVQE 120
  121 AREKAYELRR LESYKYIDEK GKDQGINIRH RVKQILEMMN DDELLQAERQ KANSDDKSKY 180
  181 RGFDQYDMKM SGSSFKSSNS GYDNKWDKED SFSSSVTKKY DDQYKSKEVS NFSFSSNVNR 240
  241 SPSPELGFVD DSKKKDDDDG FGDFVSSRSS QPAATNKSKP NPSKSFFDDP IPAIPPPSGA 300
  301 PSNYVAPPLS PVSKNAPRNM DLLFDVSAPT PAAPQNNGAP IDLFGKLDAP VVNAAPAVAP 360
  361 SNGGLDLFAF GAAPMAQSIP MATPVAAPIN TASNGSFNGF DFGSSFGSTN NSTPSYGGAA 420
  421 PLQPMSGLSQ PQAQPAQSNL GGPSPKIGNS FAGLDQFMSL SLGSTNSNAP KAKTLNQMMG 480
  481 GNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] PSI-BLAST 73.30103 Epsin 1
    2 View Details [185..375] FFAS03 1.16 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    3 View Details [376..483] MSA 2.257992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle