| Protein: | rsd-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 483 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rsd-3.
| Description | E-value | Query Range |
Subject Range |
|
|
317.0 | [0..33] | [438..34] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MSDLLAGITT SIKSTANAIT KNEYVRKVTE SMNDAIMNYP KAMMDVREAT NEDPWGPTGP 60
61 QMKKICEYTR SRYMEDFYNV YTPLFQRMLE NNKDAWRRVY KSLILLDYLL KNGSERFVQE 120
121 AREKAYELRR LESYKYIDEK GKDQGINIRH RVKQILEMMN DDELLQAERQ KANSDDKSKY 180
181 RGFD
|
| Detection Method: |  |
| Confidence: | 73.30103 |
| Match: | 1h0aA |
| Description: | Epsin 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [185-375] |
1 11 21 31 41 51
| | | | | |
1 QYDMKMSGSS FKSSNSGYDN KWDKEDSFSS SVTKKYDDQY KSKEVSNFSF SSNVNRSPSP 60
61 ELGFVDDSKK KDDDDGFGDF VSSRSSQPAA TNKSKPNPSK SFFDDPIPAI PPPSGAPSNY 120
121 VAPPLSPVSK NAPRNMDLLF DVSAPTPAAP QNNGAPIDLF GKLDAPVVNA APAVAPSNGG 180
181 LDLFAFGAAP M
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [376-483] |
1 11 21 31 41 51
| | | | | |
1 AQSIPMATPV AAPINTASNG SFNGFDFGSS FGSTNNSTPS YGGAAPLQPM SGLSQPQAQP 60
61 AQSNLGGPSP KIGNSFAGLD QFMSLSLGST NSNAPKAKTL NQMMGGNN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
