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Protein Overview: col-125

General Information:
Name(s) found: col-125 / CE03038 [WormBase]
Description(s) found:
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  • WBGene00000699 locus:col-125 status:Confirmed UniProt:Q18302 protein_id:CAA92729.1 [WormBase]
  • pir||T19564 hypothetical protein C29F4.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3874528|emb|CAA92729.1| C. elegans protein C29F4.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17538876|ref|NP_502107.1| COLlagen family member (col-125) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03038 WBGene00000699 locus:col-125 collagen status:Confirmed TR:Q18302 protein_id:CAA92729.1 [wormpep150.fasta]
  • 03038 WBGene00000699 locus:col-125 collagen status:Confirmed TR:Q18302 protein_id:CAA92729.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (28.7 kD) (col-125) [Caenorhabditis elegans]gi|3874528|emb|CAA92729.1| Hypothetical protein C29F4.1 [Caenorhabditis elegans]gi|7496672|pir||T19564 hypothetical protein C29F4.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:col-125 collagen status:Partially_confirmed TR:Q18302 protein_id:CAA92729.1 [wormpep115.fasta.reversed]
  • CE03038 collagen status:Partially_confirmed TR:Q18302 protein_id:CAA92729.1 [wormpep80.hongbin]
  • CE03038 WBGene00000699 locus:col-125 collagen status:Confirmed UniProt:Q18302_CAEEL protein_id:CAA92729.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03038 WBGene00000699 locus:col-125 collagen status:Confirmed UniProt:Q18302_CAEEL protein_id:CAA92729.1| [wormORF-contam.fasta]
  • Hypothetical protein C29F4.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C29F4.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03038 WBGene00000699 locus:col-125 collagen status:Confirmed UniProt:Q18302 protein_id:CAA92729.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03038 WBGene00000699 locus:col-125 status:Confirmed UniProt:Q18302 protein_id:CAA92729.1 [wormpep246-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-125 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEQRIKAY RFVAYSAVAF SVVAVISVCV TLPMVYNYVH HVKRTMHSEI NFCKGSAKDI  60
   61 WSEVNQLKSI PSGNRTARQA GYDAGVTGGA ASAGGCDACC LPGAAGPAGT PGKPGRPGKP 120
  121 GAPGLPGNPG RPPQQPCEPI TPPPCKPCPA GPAGAPGPAG PAGDAGANGN PGAPGQDGQP 180
  181 GAPGNKGPSG PNGNPGAPGA PGQPGQDAPS EPITPGAPGP AGPAGPQGQP GAPGQPGHDG 240
  241 QPGAPGPKGP NGNPGAPGAD GNPGAPGQAG TAGGAGEKGI CPKYCAIDGG VFFEDGTRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 26.09691 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle