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Protein Overview: eff-1

General Information:
Name(s) found: eff-1 / CE03028 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001159 locus:eff-1 status:Confirmed UniProt:G5ECA1 protein_id:CAA91123.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 658 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IDA]
    integral to membrane [IEALink to PubMed article]
    extracellular region [IDA]
    Biological Process: tail morphogenesis [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    embryonic body morphogenesis [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    syncytium formation by plasma membrane fusion [IMPLink to PubMed article]
    tail tip morphogenesis [IMPLink to PubMed article]
    plasma membrane fusion [IMPLink to PubMed articleLink to PubMed article]
    phospholipid metabolic process [IEALink to PubMed article]
    pharyngeal muscle development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed articleLink to PubMed article]
    lipid catabolic process [IEALink to PubMed article]
    oviposition [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: phospholipase A2 activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPFEWSPQ FILLLLAVTT YGFPLEEKFD GLFRAEPPHC SKTPIVRAQT SQNAMSSIAR  60
   61 GMQMQFSIGL HTAVCFRLYE DTQLASQEIN DDENAGNQTS LLHTIRLEKL EHHHPITQRY 120
  121 TFGIPEVHAS CICECDATSS TCTAESHQFT ACPESDKSDE TSSCYRTFFP NQTPIGCSED 180
  181 DIPKLCCDVR FKPYKNMTFL AVKLEQPTTY ATFVYAAYDF VNGYWVEKDK TKIRSQLDGG 240
  241 TQDRHLDQKR RISLAVTAGG RASHQLETGM YFSRTSNGGE TEELRMQPLN EITDNNFDRL 300
  301 GWYRMDDSGH FHVNNGVVKM DDIHKAKVKN CKEQTYKSIL SANHYMPGHF NLTRPLEVIK 360
  361 PWIQSARIFD SSLRQAVVTH AEGTNLQISI HLDDEVESQN LVFFHNASRI RDFSGSIIVD 420
  421 SKSNRLFNLT VYEASGKIDG SVKMSTGFGS DTIHTFTAYV SDLHASNRSM IIPLPAIVGQ 480
  481 GARAICLRAD SMADIDKICH VIEYFESPLE IDLVEGKWHE MIGTCPTCNQ INFNGMMKFL 540
  541 NPAHWIKGIS SIGDGVMIAT DIVVYLGVLC ILYLLITKII VPLVRCWVCP MSIFCNGSSS 600
  601 SSKNKNDKRR KEREERRRKD KFVSESEDGA RSSSEPHDTL ARYHGNHSER HYSSSQYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] MSA 1.006934 View MSA. No confident structure predictions are available.
    2 View Details [139..221] deduced N/A No confident structure predictions are available.
    3 View Details [222..397] deduced N/A No confident structure predictions are available.
    4 View Details [398..658] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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