Protein: | eff-1 |
Organism: | Caenorhabditis elegans |
Length: | 658 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eff-1.
Description | E-value | Query Range |
Subject Range |
|
1166.0 | [0..1] | [658..1] |
Region A: Residues: [1-138] |
1 11 21 31 41 51 | | | | | | 1 MEPPFEWSPQ FILLLLAVTT YGFPLEEKFD GLFRAEPPHC SKTPIVRAQT SQNAMSSIAR 60 61 GMQMQFSIGL HTAVCFRLYE DTQLASQEIN DDENAGNQTS LLHTIRLEKL EHHHPITQRY 120 121 TFGIPEVHAS CICECDAT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [139-221] |
1 11 21 31 41 51 | | | | | | 1 SSTCTAESHQ FTACPESDKS DETSSCYRTF FPNQTPIGCS EDDIPKLCCD VRFKPYKNMT 60 61 FLAVKLEQPT TYATFVYAAY DFV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [222-397] |
1 11 21 31 41 51 | | | | | | 1 NGYWVEKDKT KIRSQLDGGT QDRHLDQKRR ISLAVTAGGR ASHQLETGMY FSRTSNGGET 60 61 EELRMQPLNE ITDNNFDRLG WYRMDDSGHF HVNNGVVKMD DIHKAKVKNC KEQTYKSILS 120 121 ANHYMPGHFN LTRPLEVIKP WIQSARIFDS SLRQAVVTHA EGTNLQISIH LDDEVE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [398-658] |
1 11 21 31 41 51 | | | | | | 1 SQNLVFFHNA SRIRDFSGSI IVDSKSNRLF NLTVYEASGK IDGSVKMSTG FGSDTIHTFT 60 61 AYVSDLHASN RSMIIPLPAI VGQGARAICL RADSMADIDK ICHVIEYFES PLEIDLVEGK 120 121 WHEMIGTCPT CNQINFNGMM KFLNPAHWIK GISSIGDGVM IATDIVVYLG VLCILYLLIT 180 181 KIIVPLVRCW VCPMSIFCNG SSSSSKNKND KRRKEREERR RKDKFVSESE DGARSSSEPH 240 241 DTLARYHGNH SERHYSSSQY I |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.