| Protein: | eff-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 658 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eff-1.
| Description | E-value | Query Range |
Subject Range |
|
|
1166.0 | [0..1] | [658..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MEPPFEWSPQ FILLLLAVTT YGFPLEEKFD GLFRAEPPHC SKTPIVRAQT SQNAMSSIAR 60
61 GMQMQFSIGL HTAVCFRLYE DTQLASQEIN DDENAGNQTS LLHTIRLEKL EHHHPITQRY 120
121 TFGIPEVHAS CICECDAT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-221] |
1 11 21 31 41 51
| | | | | |
1 SSTCTAESHQ FTACPESDKS DETSSCYRTF FPNQTPIGCS EDDIPKLCCD VRFKPYKNMT 60
61 FLAVKLEQPT TYATFVYAAY DFV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [222-397] |
1 11 21 31 41 51
| | | | | |
1 NGYWVEKDKT KIRSQLDGGT QDRHLDQKRR ISLAVTAGGR ASHQLETGMY FSRTSNGGET 60
61 EELRMQPLNE ITDNNFDRLG WYRMDDSGHF HVNNGVVKMD DIHKAKVKNC KEQTYKSILS 120
121 ANHYMPGHFN LTRPLEVIKP WIQSARIFDS SLRQAVVTHA EGTNLQISIH LDDEVE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [398-658] |
1 11 21 31 41 51
| | | | | |
1 SQNLVFFHNA SRIRDFSGSI IVDSKSNRLF NLTVYEASGK IDGSVKMSTG FGSDTIHTFT 60
61 AYVSDLHASN RSMIIPLPAI VGQGARAICL RADSMADIDK ICHVIEYFES PLEIDLVEGK 120
121 WHEMIGTCPT CNQINFNGMM KFLNPAHWIK GISSIGDGVM IATDIVVYLG VLCILYLLIT 180
181 KIIVPLVRCW VCPMSIFCNG SSSSSKNKND KRRKEREERR RKDKFVSESE DGARSSSEPH 240
241 DTLARYHGNH SERHYSSSQY I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
