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Protein Overview: ran-3

General Information:
Name(s) found: ran-3 / CE03024 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00004304 locus:ran-3 Regulator of chromosome condensation status:Confirmed UniProt:Q18211 protein_id:CAA91119.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 569 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    spindle organization [IMP]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAEQRMDT SEVELPNDNV NEQGNKTPRA DQPESSASGA RNHGEDEEVT EQVELAAMET  60
   61 EASDSIVDNV PKTPRRAGRP KKLPSTSTAA AESAVTPGKR GRKRKGSESV NTTINSTMNS 120
  121 TLNEPKTPGR KQAKLVAPLL TYDLFAPSII GDRVLSCGEG EALGHPGRTT TKKPRKVDIF 180
  181 EEEGLKPLQA VAGGVHSAVL TSEGEVYMCG INEKGTVPAE GVEKEGSTDE FAKVKFEEDI 240
  241 EKEGKIVMLA AGASFTAALT DQGSVIAWGN LRNSNGNVDV HPLLHKMQEA PVVIVHQAKR 300
  301 KIVKIAAGEN HLVMLDEKGC LLTFGDGEMG QLGRSSRTKT IRSKYMCDES GDHLLVPLRF 360
  361 KHKGKFFDVV AKNVFASGFW TIVHGEDGKY YAFGLNNYAQ LGIKVDEADV GQDGQDNREL 420
  421 RVFLPAEAPA FGAERTFVNI EGVQHVVILG SDGKVFAMGK NTDNALGLGN WTGKDDQQHW 480
  481 LYDTIQEIEF DSKIVGVSAK LATSIAWSED GTAYAWGFDT TGQLGLGLKD EDEKMVSKPE 540
  541 EISSAHLDGY SIIGASISDQ HTLIIAKKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..569] PSI-BLAST 87.221849 Regulator of chromosome condensation RCC1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • Ran guanyl-nucleotide exchange factor activity
    		•  1.99390987036621 bayes_pls_golite062009
  • binding
    		•  1.94765972306941 bayes_pls_golite062009
  • protein binding
    		•  0.568399753749593 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  0.290397858094315 bayes_pls_golite062009
  • GTPase regulator activity
    		•  0.284277561587354 bayes_pls_golite062009
  • catalytic activity
    		•  0.261970921089142 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
    		•  0.185600765994903 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.169745277614311 bayes_pls_golite062009
  • small GTPase regulator activity
    		•  0.0831999559001558 bayes_pls_golite062009
  • Ras guanyl-nucleotide exchange factor activity
    		•  0.0619395994301855 bayes_pls_golite062009
  • ligase activity
    		•  0.0362651353144661 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle