| Protein: | ran-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ran-3.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..18] | [565..32] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MSTAEQRMDT SEVELPNDNV NEQGNKTPRA DQPESSASGA RNHGEDEEVT EQVELAAMET 60
61 EASDSIVDNV PKTPRRAGRP KKLPSTSTAA AESAVTPGKR GRKRKGSESV N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-569] |
1 11 21 31 41 51
| | | | | |
1 TTINSTMNST LNEPKTPGRK QAKLVAPLLT YDLFAPSIIG DRVLSCGEGE ALGHPGRTTT 60
61 KKPRKVDIFE EEGLKPLQAV AGGVHSAVLT SEGEVYMCGI NEKGTVPAEG VEKEGSTDEF 120
121 AKVKFEEDIE KEGKIVMLAA GASFTAALTD QGSVIAWGNL RNSNGNVDVH PLLHKMQEAP 180
181 VVIVHQAKRK IVKIAAGENH LVMLDEKGCL LTFGDGEMGQ LGRSSRTKTI RSKYMCDESG 240
241 DHLLVPLRFK HKGKFFDVVA KNVFASGFWT IVHGEDGKYY AFGLNNYAQL GIKVDEADVG 300
301 QDGQDNRELR VFLPAEAPAF GAERTFVNIE GVQHVVILGS DGKVFAMGKN TDNALGLGNW 360
361 TGKDDQQHWL YDTIQEIEFD SKIVGVSAKL ATSIAWSEDG TAYAWGFDTT GQLGLGLKDE 420
421 DEKMVSKPEE ISSAHLDGYS IIGASISDQH TLIIAKKN
|
| Detection Method: | |
| Confidence: | 87.221849 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Ran guanyl-nucleotide exchange factor activity | 1.99390987036621 | bayes_pls_golite062009 |
| binding | 1.94765972306941 | bayes_pls_golite062009 |
| protein binding | 0.568399753749593 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.290397858094315 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.284277561587354 | bayes_pls_golite062009 |
| catalytic activity | 0.261970921089142 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.185600765994903 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.169745277614311 | bayes_pls_golite062009 |
| small GTPase regulator activity | 0.0831999559001558 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.0619395994301855 | bayes_pls_golite062009 |
| ligase activity | 0.0362651353144661 | bayes_pls_golite062009 |
