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Protein Overview: CE02998

General Information:
Name(s) found: CE02998 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00007472 chitinase status:Partially_confirmed UniProt:Q17839 protein_id:CAA91152.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 459 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSENITPRV NDLLLENRDN RRRNGNALST KTITYSISIL VVILIMAIPI AYTLSEIVMY  60
   61 AYRNNETASK YIGIIINSIN VRALHAPKKA EDVDQPPSAK CNKRIVGYYT DWEPRKISAK 120
  121 QLQKLTHLIF TNVPMNSSGH VFFENLAQRR RFLEINRKAQ LMNVKVMFSI GGHKNAEHYS 180
  181 TVVADSTKRS VFIDSIVSFI KSNNASGVDL FWEWPNISEM NDFITTIKEL RKKLAALTKA 240
  241 QPKGTRYLLS IIVPSSPSDL EYYLRMDGLL HYVDFLNVLT YGYYAPWSGV NGKFVGPNAP 300
  301 LYGGNRENVD ETMQYLICKT RTPSKLNMAL SFYGRYWENV NDNVPDEMFK EADLINGKAQ 360
  361 GMFVAWKNLA GRGWDKSEAL WHEETQIPYI WNSEERKFFV FENERSLQAK MDYAADHNIG 420
  421 GVYIWALGAD DNNDTLLNVV SSADLCEGGS GNTLISLCG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.
    2 View Details [99..459] PSI-BLAST 88.045757 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • growth factor activity
    		•  2.82687310390294 bayes_pls_golite062009
  • receptor binding
    		•  1.60923678333208 bayes_pls_golite062009
  • binding
    		•  1.07141933768756 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.80333288291596 bayes_pls_golite062009
  • protein binding
    		•  0.41522498233974 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.141107738097631 bayes_pls_golite062009
  • pattern binding
    		•  0.113396113487931 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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