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Protein Overview: cpna-3

General Information:
Name(s) found: cpna-3 / CE02950 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00007221 locus:cpna-3 status:Confirmed UniProt:Q17559 protein_id:CAA92434.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAYGIEITF AIRNARFYPS ADGVSLKIFS LDKDMEVVEK VAETEAIYGQ SDAFFTEKLN  60
   61 LNYRIEKMQR YRVTINVLNS STKTIMGSMG TADFDISMMF ACGGRLILLI ASPLAPCSLE 120
  121 IVGKVPDYYS QFLRIRFSGN YLHSPSDVIP LQLYYILSIP TEERTIMLYK SEMLRETKYP 180
  181 EWAAFSIPLF LLNYFNESSI QLHVYNYTPN HDDQLVGHCT TTLTQLQQGV GHFNSYMLME 240
  241 PNGKRIHEKT CIELKELSLE NGPTFFQMME NNVKIQLTSA IDLTASNGNP VNQSSLHYIH 300
  301 PHQPSPYLEA LLQTVPPLLA YLPNPQNPHI GALGFGAKVQ VPGGALQLSH CFCLNGTPTD 360
  361 PRVEGLGGLL SAYRTAVMGL QPFAPTDFSE VIYFMSKFAK AESRRHVGLY FVLIIYSDGG 420
  421 PANALNMKRS IDAIVDASPH PMSIIGVGMG QDRDHSPMRN LEKLTLKHSD GRLLVRQNYS 480
  481 YVDPSDLESS DVLAMIPIQM AQWKRMFHFD PK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 51.0 Synaptogamin I
    2 View Details [263..512] FFAS03 1.9 A domain of Factor B

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.81919531784101 bayes_pls_golite062009
  • protein binding
    		•  1.45085467238549 bayes_pls_golite062009
  • integrin binding
    		•  0.339173113651591 bayes_pls_golite062009
  • signal transducer activity
    		•  0.329682216036263 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.329682216036263 bayes_pls_golite062009
  • transporter activity
    		•  0.0558594515749923 bayes_pls_golite062009
  • catalytic activity
    		•  0.0380261580236634 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle