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Protein Overview: hsp-25

General Information:
Name(s) found: hsp-25 / CE02466 [WormBase]
Description(s) found:
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  • WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q17849 protein_id:CCD63801.1 [WormBase]
  • gi|868278|gb|AAA68804.1| Heat shock protein protein 25, isoform a [Caenorhabditis elegans] [NCBI NR]
  • pir||T15466 hypothetical protein C09B8.6 - Caenorhabditis elegans [NCBI NR]
  • gi|71982751|ref|NP_001024374.1| Heat Shock Protein family member (hsp-25) [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_509009.1| heat shock protein (hsp-25) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Partially_confirmed TR:Q17849 protein_id:AAA68804.1 [wormpep150.fasta]
  • 02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Partially_confirmed TR:Q17849 protein_id:AAA68804.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • heat shock protein (hsp-25) [Caenorhabditis elegans]gi|868278|gb|AAA68804.1| Heat shock protein protein 25, isoform a [Caenorhabditis elegans]gi|7495724|pir||T15466 hypothetical protein C09B8.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:hsp-25 Small heat shock protein status:Partially_confirmed TR:Q17849 protein_id:AAA68804.1 [wormpep115.fasta.reversed]
  • CE02466 Small heat shock protein status:Partially_confirmed TR:Q17849 protein_id:AAA68804.1 [wormpep80.hongbin]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Confirmed UniProt:Q17849_CAEEL protein_id:AAA68804.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Confirmed UniProt:Q17849_CAEEL protein_id:AAA68804.1| [wormORF-contam.fasta]
  • Heat Shock Protein family member (hsp-25) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Heat shock protein protein 25, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Confirmed TR:Q17849 protein_id:AAA68804.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Confirmed UniProt:Q17849 protein_id:AAA68804.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE02466 WBGene00002023 locus:hsp-25 Small heat shock protein status:Confirmed UniProt:Q17849 protein_id:CCD63801.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE02466 WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q17849 protein_id:CCD63801.1 [wormpep246-ecoli-contam.fasta]
  • Heat Shock Protein OS=Caenorhabditis elegans GN=hsp-25 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to heat [IEALink to PubMed article]
    Molecular Function: structural constituent of eye lens [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTYTRTYSY SKREMSERRI DVNRSNYSVI DNEFGNMRDR FEQEMRRVEE EMKRLRSEFE  60
   61 GYRPNGGPPA AISNQPYNAY SNTSSHHETS NRTGGFGSPL PPPSFHGPSD LMAHRPTYDP 120
  121 YLDNLKSPLI KDESDGKTLR LRFDVANYKP EEVTVKTIDN RLLVHAKHEE KTPQRTVFRE 180
  181 YNQEFLLPRG TNPEQISSTL STDGVLTVEA PLPQLAIQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] PSI-BLAST 18.39794 CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle