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Protein Overview: spdl-1

General Information:
Name(s) found: spdl-1 / CE02456 [WormBase]
Description(s) found:
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  • WBGene00015515 locus:spdl-1 status:Confirmed UniProt:Q17695 protein_id:CCD61463.1 [WormBase]
  • pir||T15425 hypothetical protein C06A8.5 - Caenorhabditis elegans [NCBI NR]
  • gi|17531553|ref|NP_495637.1| SPinDLy (Drosophila chromosome segregation) homolog family member (spdl-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1055047|gb|AAA81050.1| Hypothetical protein C06A8.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE02456 WBGene00015515 status:Confirmed TR:Q17695 protein_id:AAA81050.1 [wormpep150.fasta]
  • 02456 WBGene00015515 status:Confirmed TR:Q17695 protein_id:AAA81050.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein, with 5 coiled coil-4 domains (55.3 kD) (2I73) [Caenorhabditis elegans]gi|1055047|gb|AAA81050.1| Hypothetical protein C06A8.5 [Caenorhabditis elegans]gi|7495494|pir||T15425 hypothetical protein C06A8.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q17695 protein_id:AAA81050.1 [wormpep115.fasta.reversed]
  • CE02456 status:Partially_confirmed TR:Q17695 protein_id:AAA81050.1 [wormpep80.hongbin]
  • CE02456 WBGene00015515 locus:spdl-1 status:Confirmed UniProt:Q17695_CAEEL protein_id:AAA81050.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE02456 WBGene00015515 locus:spdl-1 status:Confirmed UniProt:Q17695_CAEEL protein_id:AAA81050.1| [wormORF-contam.fasta]
  • C06A8.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C06A8.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE02456 WBGene00015515 locus:spdl-1 status:Confirmed UniProt:Q17695 protein_id:AAA81050.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE02456 WBGene00015515 locus:spdl-1 status:Confirmed UniProt:Q17695 protein_id:CCD61463.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • SPinDLy (Drosophila chromosome segregation) homolog OS=Caenorhabditis elegans GN=spdl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: kinetochore [IDA]
    microtubule [IDA]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDDEEKLQL LADVERLKKI LRQKDEMLEE MEDDLKNQGK PCSSKLSLEE RAQELSEQLR  60
   61 DLHVEMDGKN ATILDRDALI DSLRSEIDKL EKINKEFANG SVIPEHDDSN SFGESEMLRI 120
  121 SEDCQKYKET ATALYERNAE LEKEAVNLKD EIESMMDHIR DLKNHMETRD EEIARLEGEL 180
  181 FDERNSHEGK LAARGNSMFS EVIDAERKVE EDLKVLHGEN RALKGMVKRL RMEVEEVEER 240
  241 LRSSTKRFNV TRMTTSDIDV KEMRRLRDRV CHLETERVHL WERMFIKMRS IPKREVGALI 300
  301 TGYFKSFELS IASVKGGFDG LMKDNEKYVT IIRGLQQEVE NLKADIVQLQ FDNKCAHRKA 360
  361 APVVNKDFEH PLLAAPLKTL NNGRPSFFIK PKNVEPMPQL GHSLSSIAVT PQKPAAKFTT 420
  421 RSSIKDDTSE WAERRMKAQA EKKLATPTPR YNYIKLSEPV PKFKPAVLQM PSTSETKEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 20.0 Heavy meromyosin subfragment
    2 View Details [342..479] PSI-BLAST 9.69897 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle