| Protein: | spdl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 479 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spdl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..16] | [478..1845] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MPDDEEKLQL LADVERLKKI LRQKDEMLEE MEDDLKNQGK PCSSKLSLEE RAQELSEQLR 60
61 DLHVEMDGKN ATILDRDALI DSLRSEIDKL EKINKEFANG SVIPEHDDSN SFGESEMLRI 120
121 SEDCQKYKET ATALYERNAE LEKEAVNLKD EIESMMDHIR DLKNHMETRD EEIARLEGEL 180
181 FDERNSHEGK LAARGNSMFS EVIDAERKVE EDLKVLHGEN RALKGMVKRL RMEVEEVEER 240
241 LRSSTKRFNV TRMTTSDIDV KEMRRLRDRV CHLETERVHL WERMFIKMRS IPKREVGALI 300
301 TGYFKSFELS IASVKGGFDG LMKDNEKYVT IIRGLQQEVE N
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-479] |
1 11 21 31 41 51
| | | | | |
1 LKADIVQLQF DNKCAHRKAA PVVNKDFEHP LLAAPLKTLN NGRPSFFIKP KNVEPMPQLG 60
61 HSLSSIAVTP QKPAAKFTTR SSIKDDTSEW AERRMKAQAE KKLATPTPRY NYIKLSEPVP 120
121 KFKPAVLQMP STSETKEN
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
