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Protein Overview: cchl-1

General Information:
Name(s) found: cchl-1 / CE02327 [WormBase]
Description(s) found:
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  • WBGene00011527 locus:cchl-1 Probable cytochrome c-type heme lyase status:Confirmed UniProt:P53703 protein_id:CAA88969.1 [WormBase]
  • pir||T24579 hypothetical protein T06D8.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3879529|emb|CAA88969.1| C. elegans protein T06D8.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17536071|ref|NP_496403.1| Cytochrome C Heme-Lyase family member (cchl-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1705692|sp|P53703.1|CCHL_CAEEL RecName: Full=Probable cytochrome c-type heme lyase; Short=CCHL; AltName: Full=Holocytochrome-c-type synthase [NCBI NR]
  • Probable cytochrome c-type heme lyase OS=Caenorhabditis elegans GN=cchl-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE02327 WBGene00011527 locus:cchl-1 cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep150.fasta]
  • 02327 WBGene00011527 cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • holocytochrome c synthase, possibly N-myristoylated (31.3 kD) (2L524) [Caenorhabditis elegans]gi|3879529|emb|CAA88969.1| Hypothetical protein T06D8.6 [Caenorhabditis elegans]gi|7507290|pir||T24579 hypothetical protein T06D8.6 - Caenorhabditis elegansgi [nrdb_11152004_Chlamydomonas]
  • CE02327 WBGene00011527 cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep132.fasta]
  • 02327 WBGene00011527 locus:cchl-1 cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep115.fasta.reversed]
  • CE02327 cyctochrome c1 heme lyase status:Confirmed SW:P53703 protein_id:CAA88969.1 [wormpep80.hongbin]
  • CE02327 WBGene00011527 locus:cchl-1 cyctochrome c1 heme lyase status:Confirmed UniProt:P53703 protein_id:CAA88969.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE02327 WBGene00011527 locus:cchl-1 cyctochrome c1 heme lyase status:Confirmed UniProt:P53703 protein_id:CAA88969.1| [wormORF-contam.fasta]
  • Probable cytochrome c-type heme lyase (CCHL) (Holocytochrome-c-type synthase) [nr-271106-contam.fasta]
  • Hypothetical protein T06D8.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cytochrome C Heme-Lyase family member (cchl-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE02327 WBGene00011527 locus:cchl-1 status:Confirmed UniProt:P53703 protein_id:CAA88969.1 Probable cytochrome c-type heme lyase [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    holocytochrome-c synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSQSTPKV QDANADAERI RKAQHSMAAA GGGSQCPLTP EQRAAASGEN CGAGGACPVG  60
   61 ADKASINPLN NELEHPNQKP APDQPFALPT KREKSTIPKA GTETETWTYP SPQMFWNAML 120
  121 KKGWRWQDDS LSKSDMENII SIHNANNEEA WREVLKWENL LHPECAEPKL KSFKGDAKNL 180
  181 SPRARFRNLF LGYDLPFDRH DWIVDRCGTK QVQYVIDYYD GGAVDPSSKL FTILDVRPAV 240
  241 NDIGNIWDRM VVAYWRFKFE TLGFTPSLPI PPTEGHNVNH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 4.05097 View MSA. No confident structure predictions are available.
    2 View Details [194..280] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle