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Protein Overview: CE01826

General Information:
Name(s) found: CE01826 [WormBase]
Description(s) found:
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  • WBGene00016195 Putative ER lumen protein retaining receptor C28H8.4 status:Confirmed UniProt:Q09473 protein_id:CCD65964.1 [WormBase]
  • gi|669010|gb|AAA62292.1| Hypothetical protein C28H8.4 [Caenorhabditis elegans] [NCBI NR]
  • pir||H88469 protein C28H8.4 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17552358|ref|NP_498282.1| hypothetical protein C28H8.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|1169546|sp|Q09473.1|ERD22_CAEEL RecName: Full=Putative ER lumen protein retaining receptor C28H8.4 [NCBI NR]
  • Putative ER lumen protein-retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1 [Swiss-Prot]
  • (Q09473) Putative ER lumen protein retaining receptor C28H8.4 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01826 WBGene00016195 ER lumen protein retaining receptor status:Confirmed SW:Q09473 protein_id:AAA62292.1 [wormpep150.fasta]
  • 01826 WBGene00016195 ER lumen protein retaining receptor status:Confirmed SW:Q09473 protein_id:AAA62292.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • kdel receptor (24.7 kD) (3G997) [Caenorhabditis elegans]gi|669010|gb|AAA62292.1| Hypothetical protein C28H8.4 [Caenorhabditis elegans]gi|25295804|pir||H88469 protein C28H8.4 [imported] - Caenorhabditis elegansgi|1169546|sp|Q09473|ER21_CAEEL Putative ER [nrdb_11152004_Chlamydomonas]
  • ER lumen protein retaining receptor status:Partially_confirmed SW:Q09473 protein_id:AAA62292.1 [wormpep115.fasta.reversed]
  • CE01826 ER lumen protein retaining receptor status:Partially_confirmed SW:Q09473 protein_id:AAA62292.1 [wormpep80.hongbin]
  • CE01826 WBGene00016195 ER lumen protein retaining receptor status:Confirmed UniProt:Q09473 protein_id:AAA62292.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01826 WBGene00016195 ER lumen protein retaining receptor status:Confirmed UniProt:Q09473 protein_id:AAA62292.1| [wormORF-contam.fasta]
  • Hypothetical protein C28H8.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Putative ER lumen protein retaining receptor C28H8.4 [nr-271106-contam.fasta]
  • C28H8.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01826 WBGene00016195 ER lumen protein retaining receptor status:Confirmed UniProt:Q09473 protein_id:CCD65964.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE01826 WBGene00016195 status:Confirmed UniProt:Q09473 protein_id:CCD65964.1 Putative ER lumen protein retaining receptor C28H8.4 [wormpep246-ecoli-contam.fasta]
  • CE01826 WBGene00016195 status:Confirmed UniProt:Q09473 protein_id:CCD65964.1 Putative ER lumen protein-retaining receptor C28H8.4 [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: protein retention in ER lumen [IEALink to PubMed article]
    Molecular Function: ER retention sequence binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFRISADM SHLLAIIILL LKIWKSRSCS GISARSQILF ALVFTARYLD LFSTYISLYN  60
   61 TTMKITFLAA TYATVYLMFF KFRSTYMRES DTFRVELLIV PAAILALLIN HDFAPFELLW 120
  121 TFSIYLEAVA ILPQLFLLQS TGSAEVITAH YLFALGSYRA LYIFNWIYRY YTEDYFDPIV 180
  181 VVAGIVQTVL YADFFYLYVT RVVQTRKGME LPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] MSA 6.051984 View MSA. No confident structure predictions are available.
    2 View Details [113..213] MSA 2.050977 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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