YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE01826
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFRISADM SHLLAIIILL LKIWKSRSCS GISARSQILF ALVFTARYLD LFSTYISLYN  60
   61 TTMKITFLAA TYATVYLMFF KFRSTYMRES DTFRVELLIV PAAILALLIN HDFAPFELLW 120
  121 TFSIYLEAVA ILPQLFLLQS TGSAEVITAH YLFALGSYRA LYIFNWIYRY YTEDYFDPIV 180
  181 VVAGIVQTVL YADFFYLYVT RVVQTRKGME LPI

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.69
Transmembrane Helix	6	24	0.71
Cytoplasmic	25	31	0.78
Transmembrane Helix	32	51	0.79
Non-Cytoplasmic	52	61	0.63
Transmembrane Helix	62	80	0.91
Cytoplasmic	81	91	0.83
Transmembrane Helix	92	111	0.91
Non-Cytoplasmic	112	117	0.76
Transmembrane Helix	118	138	0.85
Cytoplasmic	139	146	0.78
Transmembrane Helix	147	168	0.84
Non-Cytoplasmic	169	178	0.75
Transmembrane Helix	179	199	0.90
Cytoplasmic	200	213	0.89