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Protein Overview: CE01629

General Information:
Name(s) found: CE01629 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00011076 locus:scav-5 membrane glycoprotein status:Partially_confirmed UniProt:Q09606 protein_id:CAA88547.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cell adhesion [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSIKRYEII SFVIAAFFFL SGLSMWIAFW PIFNSELRSN YKLGANDDGS LHYAAFLYAN  60
   61 PPMKNVMKFN LFNVTNPDEV KYLGAKPELI EVGGYAFLES EQKKYYEFSS DKTKMFYQNY 120
  121 KQYHYSEVDN DAGYNYNDKI MFPNSIAEGA VSTVFGPQSE FSPTAKILVS IGLVMLGEYP 180
  181 FISKTVKDVL MDGYEDPLLS VAHSGIFISL VNFYGYGSQL NYIPEMKTFA YLSGYNNSYD 240
  241 ENYWINTGYN DFNKLGFVES WAGLEQLPAS FWPTLEARQI KGPDSGSLSK IHLTKTDELP 300
  301 FFLSFMCRSF KRTYWQDGLV DGIKTMAFAV PYEEFDTTLE KNAGFRYKNQ ENVDYFPDWC 360
  361 DKNTTTSLSQ CQKTANGTFL LPPGIFPLVC YPGHNAQPPF TVLVSPPHFL YSPPEVQHHL 420
  421 SGMNPDPEKH KPMVFHQEKT SGTALQVDVR FQVNLPVVNN KGSIMSSQMP NVIIPLFYED 480
  481 SHALVKDFVM DTVWLGVIIV PRIIEYLKFV LSFISICILT TLLVIRVRVK GTVSVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] MSA 6.112993 View MSA. No confident structure predictions are available.
    2 View Details [120..268] MSA 4.122985 View MSA. No confident structure predictions are available.
    3 View Details [269..398] MSA 1.121979 View MSA. No confident structure predictions are available.
    4 View Details [399..536] MSA 6.115987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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