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Protein Overview: CE01426

General Information:
Name(s) found: CE01426 [WormBase]
Description(s) found:
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  • WBGene00021061 status:Partially_confirmed UniProt:Q23206 protein_id:CCD63988.1 [WormBase]
  • pir||G88382 protein W06E11.1 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17555494|ref|NP_497229.1| hypothetical protein W06E11.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|13559652|gb|AAK29861.1| Hypothetical protein W06E11.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE01426 WBGene00021061 status:Partially_confirmed TR:Q23206 protein_id:AAK29861.1 [wormpep150.fasta]
  • 01426 WBGene00021061 status:Partially_confirmed TR:Q23206 protein_id:AAK29861.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • dna-directed RNA polymerases III polypeptide like (3B261) [Caenorhabditis elegans]gi|13559652|gb|AAK29861.1| Hypothetical protein W06E11.1 [Caenorhabditis elegans]gi|25395654|pir||G88382 protein W06E11.1 [imported] - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q23206 protein_id:AAK29861.1 [wormpep115.fasta.reversed]
  • CE01426 status:Predicted TR:Q23206 protein_id:AAK29861.1 [wormpep80.hongbin]
  • CE01426 WBGene00021061 status:Partially_confirmed UniProt:Q23206_CAEEL protein_id:AAK29861.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01426 WBGene00021061 status:Partially_confirmed UniProt:Q23206_CAEEL protein_id:AAK29861.1| [wormORF-contam.fasta]
  • W06E11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein W06E11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01426 WBGene00021061 status:Partially_confirmed UniProt:Q23206 protein_id:AAK29861.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01426 WBGene00021061 status:Partially_confirmed UniProt:Q23206 protein_id:CCD63988.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_W06E11.1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    transcription [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: DNA-directed RNA polymerase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVDGASDDE QEQIIRKLVK KPEFLSDEED DSVEDQVVWE CDVVVCNSTP NTEMFSVSYP  60
   61 SSKRDAWDAK RFPIARYKKN VRLLEMRFMT DTQLGSYDKK KAELMYMDGD VPKKGHGIDA 120
  121 LRANDEIYEG RAFIHDHPIV NAIGFFKNGE FFIHPLTGAF EMHRSIQGLN KKKKSDGKSG 180
  181 KSDEDSSGEE EDVKPSSAAV RVKFSRPETE RQKKRREASA LHREKKIASD MWIPMKVHLK 240
  241 DGDPVAEKID GISQNGLLLD DPEASRMSIR ALVNRAIICG VKEELVIESG KEHMLSKQRI 300
  301 DDLPDPNLQL KAHMVKSHVM KTSEMRRLID PSAMSTDKMI AKLKECASLV QGVWVLDSNL 360
  361 MFKNLAPAHS NTAGKTDLYR AELWRNARDL ALCLIDGGHR VTRLTLMTCF KLSERDSDEI 420
  421 LSTFGVKCEA TRSWRLRVER DAQFLEDPAM KKHVVEQKAK WVQKFNELEK SLQESPAKSP 480
  481 KKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] MSA 3.045985 View MSA. No confident structure predictions are available.
    2 View Details [134..254] deduced N/A No confident structure predictions are available.
    3 View Details [255..375] MSA 1.04498 View MSA. No confident structure predictions are available.
    4 View Details [376..483] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle