Protein Overview: abcf-3

General Information:
Name(s) found:	abcf-3 / CE01292 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00018339 locus:abcf-3 status:Confirmed UniProt:Q20306 protein_id:CCD65308.1 [WormBase] pir\|\|T30960 hypothetical protein F42A10.1 - Caenorhabditis elegans [NCBI NR] gi\|500734\|gb\|AAA19072.1\| Hypothetical protein F42A10.1 [Caenorhabditis elegans] [NCBI NR] gi\|17553372\|ref\|NP_498339.1\| ABC transporter, class F family member (abcf-3) [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE01292 WBGene00018339 status:Confirmed TR:Q20306 protein_id:AAA19072.1 [wormpep150.fasta] 01292 WBGene00018339 status:Confirmed TR:Q20306 protein_id:AAA19072.1 [wormpep130-phg-ecoli-orf-rand.fasta] ABC transporter protein (80.3 kD) (3H265) [Caenorhabditis elegans]gi\|500734\|gb\|AAA19072.1\| Hypothetical protein F42A10.1 [Caenorhabditis elegans]gi\|7503208\|pir\|\|T30960 hypothetical protein F42A10.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas] status:Partially_confirmed TR:Q20306 protein_id:AAA19072.1 [wormpep115.fasta.reversed] CE01292 status:Partially_confirmed TR:Q20306 protein_id:AAA19072.1 [wormpep80.hongbin] CE01292 WBGene00018339 locus:abcf-3 status:Confirmed UniProt:Q20306_CAEEL protein_id:AAA19072.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE01292 WBGene00018339 locus:abcf-3 status:Confirmed UniProt:Q20306_CAEEL protein_id:AAA19072.1\| [wormORF-contam.fasta] Hypothetical protein F42A10.1 [Caenorhabditis elegans] [nr-271106-contam.fasta] F42A10.1 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE01292 WBGene00018339 locus:abcf-3 status:Confirmed TR:Q20306 protein_id:AAA19072.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta] CE01292 WBGene00018339 locus:abcf-3 status:Confirmed UniProt:Q20306 protein_id:AAA19072.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE01292 WBGene00018339 locus:abcf-3 status:Confirmed UniProt:Q20306 protein_id:CCD65308.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] ABC transporter, class F OS=Caenorhabditis elegans GN=abcf-3 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	712 amino acids
Gene Ontology:
Cellular Component:	Gram-negative-bacterium-type cell wall [IEA] membrane [IEA] integral to membrane [IEA] outer membrane-bounded periplasmic space [IEA]
Biological Process:	cell division [IEA] cobalt ion transport [IEA] D-methionine transport [IEA] phosphate transport [IEA] protein transport [IEA] nitrate transport [IEA] phosphonate transport [IEA] cytochrome complex assembly [IEA] transport [IEA] nodulation [IEA] molybdate ion transport [IEA]
Molecular Function:	ATPase activity [IEA] phosphate transmembrane transporter activity [IEA] ATPase activity, coupled to transmembrane movement of substances [IEA] nitrate transmembrane transporter activity [IEA] molybdate ion transmembrane transporter activity [IEA] protein transporter activity [IEA] cysteine-type peptidase activity [IEA] transporter activity [IEA] nucleotide binding [IEA] D-methionine transmembrane transporter activity [IEA] ATP binding [IEA] inorganic phosphate transmembrane transporter activity [IEA] nucleoside-triphosphatase activity [IEA] phosphonate transmembrane-transporting ATPase activity [IEA] toxin transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVEAIPGY LTATFPTLPI EIKDYVSAIL KENSDEITSL DEVMDAVGEH LQASVENLCE  60
   61 VGAKNACQQL LKLLHGDNLP KAIKQQEATT KRLEQTVDMA AENQNFEALQ SIWKVQTRDT 120
  121 PTTVDKKKLA KAEDRAAAKA EARADAPVER KKKKNEPSAT ASQAPIRDSG ARGANSKDIK 180
  181 LESVDISIGT KQLLSCADVT MAFGRRYGLV GRNGIGKTTL LKMISSQQLK IPAGISMLSV 240
  241 EQEVEGDDTL VLDAVLMSDT KRQTLLDREK TLQSRINKDN INDAEKTKWN DELSKLYIEM 300
  301 EALQLDKAPA RASSLLYGLG FTPDEQKRPT KEFSGGWRMR VALARALFVK PDLLLLDEPT 360
  361 NMLDMRAVYW LEGHLQGWEG TILTVSHDRK FLNEICTDIV HLHTRRLDHY KGNYDQFEKT 420
  421 MKEKLTQQQR EYESQQQLRQ HTQEFIDKFR YNAKRAPMVQ SRIKMLEKLP VLLPVELESD 480
  481 IHFKFPECEV LSNPVLQLDE VSFRYNEDSP YLFRKLNLGT HANSRICIVG ENGAGKTTLL 540
  541 KLLLDDLQPS VGLRNVNRRI RIAYFTQHHV DQLDMETSAI EVLMKNHPGK TQEDYRAALG 600
  601 RFGLAGDMAL QSVETLSGGQ KSRLAFANLA LMQPNYLILD EPTNHLDVET VEALGKALNV 660
  661 FNGGVVLVSH DEQLIELVCK ELWVVKDRMV TTLEGGLEEY RKQVYKQLQL TA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..177]	deduced	N/A	No confident structure predictions are available.
2	View Details	[178..616]	PSI-BLAST	51.522879	No description for 2iw3A was found.
3	View Details	[617..712]	PSI-BLAST	45.30103	No description for 2ffbA was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: abcf-3

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: