YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: acdh-12

General Information:
Name(s) found: acdh-12 / CE01217 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00017125 locus:acdh-12 status:Confirmed UniProt:Q19057 protein_id:CCD65900.1 [WormBase]
  • gi|861335|gb|AAA68357.1| Acyl coa dehydrogenase protein 12, isoform a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • pir||T15905 hypothetical protein E04F6.5 - Caenorhabditis elegans [NCBI NR]
  • gi|71985184|ref|NP_001022062.1| Acyl CoA DeHydrogenase family member (acdh-12) [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_495493.1| acyl-Coenzyme A dehydrogenase very long chain (66.1 kD) (2H484) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE01217 WBGene00017125 Isovaleryl-CoA dehydrogenase status:Confirmed TR:Q19057 protein_id:AAA68357.1 [wormpep150.fasta]
  • 01217 WBGene00017125 Isovaleryl-CoA dehydrogenase status:Confirmed TR:Q19057 protein_id:AAA68357.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • acyl-Coenzyme A dehydrogenase very long chain (66.1 kD) (2H484) [Caenorhabditis elegans]gi|861335|gb|AAA68357.1| Hypothetical protein E04F6.5a [Caenorhabditis elegans]gi|7498380|pir||T15905 hypothetical protein E04F6.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Isovaleryl-CoA dehydrogenase status:Confirmed TR:Q19057 protein_id:AAA68357.1 [wormpep115.fasta.reversed]
  • CE01217 Isovaleryl-CoA dehydrogenase status:Confirmed TR:Q19057 protein_id:AAA68357.1 [wormpep80.hongbin]
  • CE01217 WBGene00017125 locus:acdh-12 Isovaleryl-CoA dehydrogenase status:Confirmed UniProt:Q19057_CAEEL protein_id:AAA68357.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01217 WBGene00017125 Isovaleryl-CoA dehydrogenase status:Confirmed UniProt:Q19057_CAEEL protein_id:AAA68357.1| [wormORF-contam.fasta]
  • E04F6.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein E04F6.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01217 WBGene00017125 locus:acdh-12 Isovaleryl-CoA dehydrogenase status:Confirmed UniProt:Q19057 protein_id:AAA68357.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01217 WBGene00017125 locus:acdh-12 Isovaleryl-CoA dehydrogenase status:Confirmed UniProt:Q19057 protein_id:CCD65900.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE01217 WBGene00017125 locus:acdh-12 status:Confirmed UniProt:Q19057 protein_id:CCD65900.1 Probable acyl-CoA dehydrogenase [wormpep246-ecoli-contam.fasta]
  • Acyl CoA DeHydrogenase OS=Caenorhabditis elegans GN=acdh-12 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: acyl-CoA dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSTLSKSAR LNQTRFIRLS HSAAAAKDAK PKKVAAVDSP SFVMNLFRGK AVTDQVFPYP  60
   61 LNMTDEQKET LGMVMSPLEK MLVEVNDVVK NDETSDIPRA VLDQFAELGT FGVLVPPELE 120
  121 GSGFNNSQMA RVAEIVGAYD LGFGVVMGAH QSIGYKGILL EGTDAQKQKY LPDLATGRKF 180
  181 AAFALTEPTT GSDASSVRTR AELSADGKHY VLNGGKIWIS NGGFADVFTV FAQTPVKQAD 240
  241 GSTKDKMSAF IVERAFGGVT SGPQEKKMGI KGSNTTEVHF DNLKIPVENL LGKEGEGFKV 300
  301 AMNILNNGRF GIPAACTGAM KHCIQKTVDH ITTRVQFGKK LQEFGNIQEK LVEMISKLYA 360
  361 TESIVYMLSS NMDRGIKEYQ LEAAIGKVLA SENAWLVCDD AIQVHGGMGF MRETGLERVL 420
  421 RDLRIFRIFE GANDVLRLFI ALTGAQHAGK HLAEQASGVG GLIGLAVSRV TGGNTGSNFG 480
  481 QVVDASLQDS AKVLDQQIAL FGQTVQGLLM KHKKGIIDRQ YEMHRVADAA INIYSSAAVL 540
  541 SRATYAIKNK SSSADFERKV ATYYVDKAMK SSNRFLKDAG SGVENASKVA TIESLAKEVC 600
  601 GNGGLTLQHP VEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..613] PSI-BLAST 134.0 No description for 2uxwA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle