YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE01108

General Information:
Name(s) found: CE01108 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00014220 Uncharacterized protein ZK1098.3 status:Partially_confirmed UniProt:P34603 protein_id:CAA80141.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    3'-5' exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDTTSSEDV PENKQKSLKF EIIDARMKIF KDIVKSKSSE SVKEEQIYQK SLEFFDEDLK  60
   61 SSEESVSNEE IKTGSEKELE PLNVFDIILI MLQQLPERKK PIGSLLSKWI LMNFMNWMQD 120
  121 KQSIMEQQMT EYYQKKAGLA CVKEPKNEEY LLQIFKISKE FVIDLRKSKV QEYLENQKFK 180
  181 EAAEIVMKHE VVDDYSFEQI TLPLILCDKV QIVDELLKIS KKLQKSYISF LDQFVAETDE 240
  241 TVNAFFEPYK EKGMVTINLS RFHGKSLTIF MQKFFNGQVK QFKFDLEERR DAPKFVANMK 300
  301 RKALKYFVGK RFEDHEMNDE LFCEHMKSTL PECTDKTIVQ FLILLWDTCI YERRIEALFW 360
  361 ATYSNIDRNS KYMPPDLKEE LENPTTEMKN GLEKLQALRT TKNCQEEDEQ LYVFEEQKKY 420
  421 PIRIVQNEQD LEILLSELGE LEEGMYIGYD SEFKPYHLID VSTSRLAIIQ LFFKDKAWLI 480
  481 NCVAIDNLAS RDDVWIRLYK GLFESNKFSI VGFDIRQDIE AMFTVPSINK NFKIENIQNV 540
  541 ICVKSLAENV NALSMDILNL STKTSKLSVL ADHLVGLKMD KSEQCGNWQC RPLRRNQIIY 600
  601 AVMDAVAVFE VFQKIVEVVR KHELDAEKLL VESHMITVKK EKVRRDCKNI SLIPWNEFYQ 660
  661 IIHTHRNPEK PLQKPSELKI VVDTMVLGLG KNLRLLGFDV YIPRDVTELK EFLRKMDKME 720
  721 ESEQRLVISV PSRSYEMLKS DNPNAKFVLI PNIYEKVPID LVCSFFDFFN IDISPDQDYI 780
  781 KLNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] deduced N/A No confident structure predictions are available.
    2 View Details [130..414] PSI-BLAST 27.0 STRUCTURE OF TAQ DNA POLYMERASE
    3 View Details [415..784] PSI-BLAST 68.0 STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.845290320008287 bayes_pls_golite062009
  • hydrolase activity
    		•  0.31554871338907 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.12799711467808 bayes_pls_golite062009
  • nuclease activity
    		•  0.0878151841480506 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle