| Protein: | CE01108 |
| Organism: | Caenorhabditis elegans |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01108.
| Description | E-value | Query Range |
Subject Range |
|
|
459.0 | [0..133] | [778..40] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MGDTTSSEDV PENKQKSLKF EIIDARMKIF KDIVKSKSSE SVKEEQIYQK SLEFFDEDLK 60
61 SSEESVSNEE IKTGSEKELE PLNVFDIILI MLQQLPERKK PIGSLLSKWI LMNFMNWMQD 120
121 KQSIMEQQM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [130-414] |
1 11 21 31 41 51
| | | | | |
1 TEYYQKKAGL ACVKEPKNEE YLLQIFKISK EFVIDLRKSK VQEYLENQKF KEAAEIVMKH 60
61 EVVDDYSFEQ ITLPLILCDK VQIVDELLKI SKKLQKSYIS FLDQFVAETD ETVNAFFEPY 120
121 KEKGMVTINL SRFHGKSLTI FMQKFFNGQV KQFKFDLEER RDAPKFVANM KRKALKYFVG 180
181 KRFEDHEMND ELFCEHMKST LPECTDKTIV QFLILLWDTC IYERRIEALF WATYSNIDRN 240
241 SKYMPPDLKE ELENPTTEMK NGLEKLQALR TTKNCQEEDE QLYVF
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1taqA |
| Description: | STRUCTURE OF TAQ DNA POLYMERASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.845290320008287 | bayes_pls_golite062009 |
| hydrolase activity | 0.31554871338907 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.12799711467808 | bayes_pls_golite062009 |
| nuclease activity | 0.0878151841480506 | bayes_pls_golite062009 |
|
Region A: Residues: [415-784] |
1 11 21 31 41 51
| | | | | |
1 EEQKKYPIRI VQNEQDLEIL LSELGELEEG MYIGYDSEFK PYHLIDVSTS RLAIIQLFFK 60
61 DKAWLINCVA IDNLASRDDV WIRLYKGLFE SNKFSIVGFD IRQDIEAMFT VPSINKNFKI 120
121 ENIQNVICVK SLAENVNALS MDILNLSTKT SKLSVLADHL VGLKMDKSEQ CGNWQCRPLR 180
181 RNQIIYAVMD AVAVFEVFQK IVEVVRKHEL DAEKLLVESH MITVKKEKVR RDCKNISLIP 240
241 WNEFYQIIHT HRNPEKPLQK PSELKIVVDT MVLGLGKNLR LLGFDVYIPR DVTELKEFLR 300
301 KMDKMEESEQ RLVISVPSRS YEMLKSDNPN AKFVLIPNIY EKVPIDLVCS FFDFFNIDIS 360
361 PDQDYIKLNC
|
| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 1dpiA |
| Description: | STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP |
Matching Structure (courtesy of the PDB): |
|
