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Protein Overview: ccdc-47

General Information:
Name(s) found: ccdc-47 / CE01104 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00014204 locus:ccdc-47 status:Confirmed UniProt:Q23382 protein_id:CAA84678.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVWIFLIF FIGFAISTDD NEFAEFEDEF VGSSATQAPE IQREGEPPVL KQKDDFEEED  60
   61 FGVVEEEPEE AEKVREADSD DAAPAQPLKF ADVPAHFRSN WASYQVEGIV VLIILIYMTN 120
  121 YLIGKTTNAS IAQTIFDMCR PTLEEQFAVV GDDGTTDLDK MIPSLKHDTD STFSAWCTGR 180
  181 VNVNSLFLQM KMVKRQDVVS RIMEMFTPSG DKMTIKASLE TTNDTDPLIF AVGEKKIASK 240
  241 YFKEMLDLNS FASERKQAAQ QFNLPASWQV YADQNEVVFS ILDPGVVSLL KKHEDAIEFI 300
  301 HISDQFTGPK PAEGESYTRL PEAQRYMFVS LNLQYLGQDE ESVMEILNLV FYLIDKARKM 360
  361 KLSKDAKVKA ERRRKEFEDA FLKQTHQFRQ EAAQARREEK TRERKQKLMD ESDPERQKRL 420
  421 EAKELKREAK AKSPKMKQLK VK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 1.040981 View MSA. No confident structure predictions are available.
    2 View Details [152..308] deduced N/A No confident structure predictions are available.
    3 View Details [309..442] PSI-BLAST 6.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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