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Protein Overview: pan-1

General Information:
Name(s) found: pan-1 / CE01041 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00003915 locus:pan-1 Leucine-rich repeats status:Partially_confirmed UniProt:Q21604 protein_id:CAA84337.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLSFVLL ALARIAISEE TKSCIDIEKG FKEEFNAHKQ PVCICADNGI FSTVKGFTIE  60
   61 CESASIASVS ENLASLNGTE LGRLTIRDST VNVLPQDLFE NVFAKQVKLE RCGLSTLQPN 120
  121 SFQSLGGSAE LLSLRENRIK KLEKGLFTGL KSLKTLDLAM NKIQEIDVGA FEELKKVEEL 180
  181 LLNENDIRVL KTGTFDGMKN LKKLTLQNCN LEIIQKGAFR GLNSLEQLIL SNNNLENIDW 240
  241 TIFSALKNLR VLDLGSNKIS NVEMKSFPKL EKLVLNNNTI DSMKSIKLKD LPSLVVALFD 300
  301 RNKIESIGDM DMFGLTRSDR IETLSLARNN LSQISPKAFQ HTPNLITLLL QYNQIEELSS 360
  361 RKLTHFIFKK KLIFFPDSPS QVRTPFLASL KKLVTLQLSS NNLSVIRSDE LPKSLSSLAL 420
  421 DHNVISKIEA RALEGMEIKR LYLHSNKLNY LYQGTFDSFS PKSVEAVDVS LNPWVCVCND 480
  481 PKEWLPRWLE ASEEADVAEG ALGCLAIPNC GQKEGSTVMP EEEEVYRSGW ITVAATILTI 540
  541 VTIVIMVIIA MLYFKDARYQ FPLRGRRSDS DLHKLIENDP LNIASDSILV VPAMPKRNTG 600
  601 PKKTVRFQNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..529] PSI-BLAST 47.221849 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [530..610] FFAS03 1.21 Photosynthetic reaction centre; Photosystem II reaction centre subunit H, transmembrane region


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle