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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pan-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLSFVLL ALARIAISEE TKSCIDIEKG FKEEFNAHKQ PVCICADNGI FSTVKGFTIE  60
   61 CESASIASVS ENLASLNGTE LGRLTIRDST VNVLPQDLFE NVFAKQVKLE RCGLSTLQPN 120
  121 SFQSLGGSAE LLSLRENRIK KLEKGLFTGL KSLKTLDLAM NKIQEIDVGA FEELKKVEEL 180
  181 LLNENDIRVL KTGTFDGMKN LKKLTLQNCN LEIIQKGAFR GLNSLEQLIL SNNNLENIDW 240
  241 TIFSALKNLR VLDLGSNKIS NVEMKSFPKL EKLVLNNNTI DSMKSIKLKD LPSLVVALFD 300
  301 RNKIESIGDM DMFGLTRSDR IETLSLARNN LSQISPKAFQ HTPNLITLLL QYNQIEELSS 360
  361 RKLTHFIFKK KLIFFPDSPS QVRTPFLASL KKLVTLQLSS NNLSVIRSDE LPKSLSSLAL 420
  421 DHNVISKIEA RALEGMEIKR LYLHSNKLNY LYQGTFDSFS PKSVEAVDVS LNPWVCVCND 480
  481 PKEWLPRWLE ASEEADVAEG ALGCLAIPNC GQKEGSTVMP EEEEVYRSGW ITVAATILTI 540
  541 VTIVIMVIIA MLYFKDARYQ FPLRGRRSDS DLHKLIENDP LNIASDSILV VPAMPKRNTG 600
  601 PKKTVRFQNF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle