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Protein Overview: clec-153

General Information:
Name(s) found: clec-153 / CE00953 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00008660 locus:clec-153 status:Partially_confirmed UniProt:Q19315 protein_id:CAA84654.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 580 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: sugar binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIKIFMIIC LLHKTNAQLA RDWSFQEMCN FWGGEKTYHA RKDGFKSLEG DKCTFNFPKA  60
   61 SNNQESAQQY CEDNVPYHIN NAEASEYKTT CEAEATLICK SGWVQMFGRC YKITKTMMTR 120
  121 DKAEEHCKNQ QDHTSTIAFM HREALPFRWN DYFTRVSRIW MDASKVITND LIYDIEDGNV 180
  181 LLAFDGYKYN LPNVAIARVP KDETAMVLCE YTPPMTKSES NYLLRRYGEI YYPPLVTSES 240
  241 VYMSTTSSRI RDETDQFADN KYCTNVMRPI FRGLAARSAF PTKEFVDKLE KEAAIIRSAT 300
  301 VSQSANQKGR EESECVVNQK PIHQVFASGQ GGKTLNVKID QALWRKGEPK ETCDAASWSS 360
  361 AIVLSRDGEK GLETMSDARY APIYCEAILD KYEYGPCPAG FLQYDRTELG IRWCHKLYSE 420
  421 LETTYDDAEK ECLSLGAHVS GFSDLKEKDF MHDMIMASPI KNKTFNRVWI GAQRRPECNT 480
  481 LGVEGKTGGF DTDDSKPCAR SRVFYWLHGV ALNPPDFIEH WADPNEPNFL GDKEKCVVVM 540
  541 TGSEWTHWKF GINKKINDVS CGRRYPFFCG KEAPIVKVTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 24.39794 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
    2 View Details [239..351] deduced N/A No confident structure predictions are available.
    3 View Details [352..580] FFAS03 5.23 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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