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Protein Overview: tbb-2

General Information:
Name(s) found: tbb-2 / CE00913 [WormBase]
Description(s) found:
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  • WBGene00006537 locus:tbb-2 Tubulin beta-2 chain status:Confirmed UniProt:P52275 protein_id:CAA84648.1 [WormBase]
  • pir||T19788 hypothetical protein C36E8.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3924710|emb|CAA84648.1| C. elegans protein C36E8.5, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17552540|ref|NP_497806.1| Tubulin, Beta family member (tbb-2) [Caenorhabditis elegans] [NCBI NR]
  • gi|1729845|sp|P52275.1|TBB2_CAEEL RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin [NCBI NR]
  • Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00913 WBGene00006537 locus:tbb-2 beta tubulin status:Confirmed SW:P52275 protein_id:CAA84648.1 [wormpep150.fasta]
  • 00913 WBGene00006537 locus:tbb-2 beta tubulin status:Confirmed SW:P52275 protein_id:CAA84648.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • tubulin, Beta (50.3 kD) (tbb-2) [Caenorhabditis elegans]gi|3924710|emb|CAA84648.1| Hypothetical protein C36E8.5 [Caenorhabditis elegans]gi|7497121|pir||T19788 hypothetical protein C36E8.5 - Caenorhabditis elegansgi|1729845|sp|P52275|TBB2_CAEEL Tubulin [nrdb_11152004_Chlamydomonas]
  • locus:tbb-2 beta tubulin status:Confirmed SW:P52275 protein_id:CAA84648.1 [wormpep115.fasta.reversed]
  • CE00913 locus:tbb-2 beta tubulin status:Confirmed SW:P52275 protein_id:CAA84648.1 [wormpep80.hongbin]
  • CE00913 WBGene00006537 locus:tbb-2 beta tubulin status:Confirmed UniProt:TBB2_CAEEL protein_id:CAA84648.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00913 WBGene00006537 locus:tbb-2 beta tubulin status:Confirmed UniProt:TBB2_CAEEL protein_id:CAA84648.1| [wormORF-contam.fasta]
  • Tubulin, Beta family member (tbb-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C36E8.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Tubulin beta-2 chain (Beta-2 tubulin) [nr-271106-contam.fasta]
  • CE00913 WBGene00006537 locus:tbb-2 beta tubulin status:Confirmed UniProt:P52275 protein_id:CAA84648.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00913 WBGene00006537 locus:tbb-2 status:Confirmed UniProt:P52275 protein_id:CAA84648.1 Tubulin beta-2 chain [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: tubulin complex [ISSLink to PubMed article]
    protein complex [IEALink to PubMed article]
    microtubule [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    protein polymerization [IEALink to PubMed article]
    spindle organization [IMPLink to PubMed article]
    pronuclear migration [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    meiotic spindle organization [IGILink to PubMed article]
    microtubule-based process [IEALink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    GTPase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVHVQAG QCGNQIGSKF WEVISDEHGI QPDGTFKGET DLQLERIDVY YNEANNGKYV  60
   61 PRAVLVDLEP GTMDSVRSGP FGQLFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDNVLDVI 120
  121 RKEAEGCDCL QGFQLTHSLG GGTGSGMGTL LISKIREEYP DRIMSSFSVV PSPKVSDTVV 180
  181 EPYNATLSVH QLVENTDETY CIDNEALYDI CYRTLKLTNP TYGDLNHLVS LTMSGVTTCL 240
  241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLSAKGTQA YRALTVAELT QQMFDAKNMM 300
  301 AACDPRHGRY LTVAAMFRGR MSMREVDEQM LNVQNKNSSY FVEWIPNNVK TAVCDIPPRG 360
  361 LKMAATFVGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLIS 420
  421 EYQQYQEATA EDDVDGYAEG EAGETYESEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..450] PSI-BLAST 164.0 Tubulin:stathmin-like domain complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle