Protein Overview: rnr-2

General Information:
Name(s) found:	rnr-2 / CE00874 [WormBase]
Description(s) found: Found 20 descriptions. SHOW ALL	WBGene00004392 locus:rnr-2 Ribonucleoside-diphosphate reductase small chain status:Confirmed UniProt:P42170 protein_id:CAA84688.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	381 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	hermaphrodite genitalia development [IMP] morphogenesis of an epithelium [IMP] embryonic development ending in birth or egg hatching [IMP ] determination of adult lifespan [IMP] deoxyribonucleoside diphosphate metabolic process [IEA] reproduction [IMP]
Molecular Function:	ribonucleoside-diphosphate reductase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTEIQNVE KENAGASVPK HSSNKLKLEK ELEKLEIVDQ TKAASAEETN NESEVNELDA  60
   61 DEPMLQDLDN RFVIFPLKHH DIWNFYKKAV ASFWTVEEVD LGKDMNDWEK MNGDEQYFIS 120
  121 RILAFFAASD GIVNENLCER FSNEVQVSEA RFFYGFQIAI ENIHSEMYSK LIETYIRDET 180
  181 ERNTLFNAVD EFEFIKKKAD WALRWISDKK ASFAERLIAF AAVEGIFFSG SFASIFWLKK 240
  241 RGLMPGLTHS NELISRDEGL HRDFACLLYS KLQKKLTQQR IYDIIKDAVA IEQEFLTEAL 300
  301 PVDMIGMNCR LMSQYIEFVA DHLLVELGCD KLYKSKNPFD FMENISIDGK TNFFEKRVSE 360
  361 YQRPGVMVNE AERQFDLEAD F

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	12.7205287868529	bayes_pls_golite062009
ribonucleoside-diphosphate reductase activity	12.6679910771829	bayes_pls_golite062009
oxidoreductase activity, acting on CH or CH2 groups	12.0783326936172	bayes_pls_golite062009
class I ribonucleotide reductase activity	7.27682621818194	bayes_pls_golite062009
binding	2.38747290927526	bayes_pls_golite062009
nucleic acid binding	1.65619019230429	bayes_pls_golite062009
DNA binding	1.60520679245579	bayes_pls_golite062009
protein binding	1.35559475972187	bayes_pls_golite062009
ion binding	0.214820110894452	bayes_pls_golite062009
cation binding	0.203880627974907	bayes_pls_golite062009
metal ion binding	0.203880627974907	bayes_pls_golite062009
catalytic activity	0.197328811494233	bayes_pls_golite062009
transition metal ion binding	0.168785605665701	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.24

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..381]	PSI-BLAST	130.0	Ribonucleotide reductase R2

Protein Overview: rnr-2

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: