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Protein Overview: cpg-1

General Information:
Name(s) found: cpg-1 / CE00665 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00000465 locus:cpg-1 Chondroitin proteoglycan 1 status:Confirmed UniProt:Q17802 protein_id:CAA83679.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 584 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: chitin metabolic process [IEALink to PubMed article]
    Molecular Function: chitin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLKPVLLAF LVASAYAQYG VAGMYENLPL ETTTLDGSGD GSGADNGFVS GADAVAIDTD  60
   61 CSTKEDGLYA IGGCSPQFLT CSGGISRIMD CPADLIYDPR IVACEYSYNV PQCGGVPQDV 120
  121 TSTQEAYPSE ETTVNPYAPV EEATTTPAED VTVPEETTTE AYAPVDDYST TTPAEDVPVP 180
  181 VETTASPYAP IVPYTTGAPA ADEPVTRSAV TKSCVGKADG FYSFGECSDH YTACSNGYLI 240
  241 PMQCPARLAF DEARVICDYV MNVPECTNGS GNDEGSADET TPESSGEMPY SNGYGYEETT 300
  301 TVAEDVPSTK DYAEPIAAAY VARYPSEKTT AENVPTTTIG YEPEVVETTA PYVEETTTTV 360
  361 GYKPEVEETT TEAEVPTTTV GYEPEIVETT APYVEETTTA ADVPSTTAVY EPEVVETTTE 420
  421 AEVPTTTTVG YEPEVVETTV PYVEETTTAA DVPTTTVGYE PEVEETTTEA EVPTTTVGYE 480
  481 SEVVETTAAD IPTTTIGYAP IVVESTTAAD VPTTTVPAET TTEVPACVEG ATAIEPCSQH 540
  541 YKNCVNGQEA IFICENGLFF SPEQARCAPA DQIAECHQTT VQYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] FFAS03 2.42 Tachycitin
    2 View Details [114..244] deduced N/A No confident structure predictions are available.
    3 View Details [245..379] deduced N/A No confident structure predictions are available.
    4 View Details [380..584] MSA 3.12499 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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