| Protein: | cpg-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 584 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cpg-1.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..2] | [582..1013] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MTLKPVLLAF LVASAYAQYG VAGMYENLPL ETTTLDGSGD GSGADNGFVS GADAVAIDTD 60
61 CSTKEDGLYA IGGCSPQFLT CSGGISRIMD CPADLIYDPR IVACEYSYNV PQC
|
| Detection Method: |  |
| Confidence: | 2.42 |
| Match: | 1dqcA |
| Description: | Tachycitin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [114-244] |
1 11 21 31 41 51
| | | | | |
1 GGVPQDVTST QEAYPSEETT VNPYAPVEEA TTTPAEDVTV PEETTTEAYA PVDDYSTTTP 60
61 AEDVPVPVET TASPYAPIVP YTTGAPAADE PVTRSAVTKS CVGKADGFYS FGECSDHYTA 120
121 CSNGYLIPMQ C
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [245-379] |
1 11 21 31 41 51
| | | | | |
1 PARLAFDEAR VICDYVMNVP ECTNGSGNDE GSADETTPES SGEMPYSNGY GYEETTTVAE 60
61 DVPSTKDYAE PIAAAYVARY PSEKTTAENV PTTTIGYEPE VVETTAPYVE ETTTTVGYKP 120
121 EVEETTTEAE VPTTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [380-584] |
1 11 21 31 41 51
| | | | | |
1 VGYEPEIVET TAPYVEETTT AADVPSTTAV YEPEVVETTT EAEVPTTTTV GYEPEVVETT 60
61 VPYVEETTTA ADVPTTTVGY EPEVEETTTE AEVPTTTVGY ESEVVETTAA DIPTTTIGYA 120
121 PIVVESTTAA DVPTTTVPAE TTTEVPACVE GATAIEPCSQ HYKNCVNGQE AIFICENGLF 180
181 FSPEQARCAP ADQIAECHQT TVQYY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
