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Protein Overview: CE00461

General Information:
Name(s) found: CE00461 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00022798 locus:fahd-1 Uncharacterized protein ZK688.3 status:Confirmed UniProt:P34673 protein_id:CCD62534.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    Molecular Function: 5-carboxymethyl-2-hydroxymuconate delta-isomerase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLAGFRNL ATKIVCVGRN YKDHALELGN AIPKKPMLFV KTVNSFIVEG EPIVAPPGCQ  60
   61 NLHQEVELGV VISKKASRIS KSDAMDYIGG YTVALDMTAR DFQDEAKKAG APWFLAKSFD 120
  121 GSCPIGGFLP VSDIPNPHDV ELFCKINGKD QQRCRTDVMI FDIPTLLEYT TQFFTLEVGD 180
  181 VVLTGTPAGV TKINSGDVIE FGLTDKLNSK FNVQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 66.69897 X-ray structure of homo sapiens protein FLJ36880

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  3.47506644461251 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  3.3661586952187 bayes_pls_golite062009
  • catalytic activity
    		•  1.43840931606572 bayes_pls_golite062009
  • binding
    		•  0.917289226788792 bayes_pls_golite062009
  • protein binding
    		•  0.334167038998597 bayes_pls_golite062009
  • hydrolase activity
    		•  0.145057589038159 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle