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Protein Overview: pri-1

General Information:
Name(s) found: pri-1 / CE00220 [WormBase]
Description(s) found:
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  • WBGene00004180 locus:pri-1 DNA primase small subunit status:Confirmed UniProt:P34471 protein_id:CAA80161.1 [WormBase]
  • pir||S40976 hypothetical protein F58A4.4 - Caenorhabditis elegans [NCBI NR]
  • gi|464461|sp|P34471.1|PRI1_CAEEL RecName: Full=DNA primase small subunit [NCBI NR]
  • gi|3877820|emb|CAA80161.1| C. elegans protein F58A4.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17554400|ref|NP_499126.1| DNA PRImase homolog family member (pri-1) [Caenorhabditis elegans] [NCBI NR]
  • DNA primase small subunit OS=Caenorhabditis elegans GN=pri-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00220 WBGene00004180 locus:pri-1 DNA primase 49Kd subunit status:Confirmed [wormpep150.fasta]
  • 00220 WBGene00004180 locus:pri-1 DNA primase 49Kd subunit status:Confirmed [wormpep130-phg-ecoli-orf-rand.fasta]
  • DNA PRImase homolog (48.1 kD) (pri-1) [Caenorhabditis elegans]gi|3877820|emb|CAA80161.1| Hypothetical protein F58A4.4 [Caenorhabditis elegans]gi|482183|pir||S40976 hypothetical protein F58A4.4 - Caenorhabditis elegansgi|464461|sp|P34471|PRI1_CAEEL Prob [nrdb_11152004_Chlamydomonas]
  • locus:pri-1 DNA primase 49Kd subunit status:Partially_confirmed SW:P34471 protein_id:CAA80161.1 [wormpep115.fasta.reversed]
  • CE00220 locus:pri-1 DNA primase 49Kd subunit status:Partially_confirmed SW:P34471 protein_id:CAA80161.1 [wormpep80.hongbin]
  • CE00220 WBGene00004180 locus:pri-1 DNA primase 49Kd subunit status:Confirmed UniProt:PRI1_CAEEL protein_id:CAA80161.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00220 WBGene00004180 locus:pri-1 DNA primase 49Kd subunit status:Confirmed UniProt:PRI1_CAEEL protein_id:CAA80161.1| [wormORF-contam.fasta]
  • Hypothetical protein F58A4.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • DNA PRImase homolog family member (pri-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • DNA primase small subunit [nr-271106-contam.fasta]
  • CE00220 WBGene00004180 locus:pri-1 DNA primase 49Kd subunit status:Confirmed UniProt:P34471 protein_id:CAA80161.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00220 WBGene00004180 locus:pri-1 status:Confirmed UniProt:P34471 protein_id:CAA80161.1 DNA primase small subunit [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 410 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    DNA replication, synthesis of RNA primer [IEALink to PubMed article]
    Molecular Function: DNA primase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNSIRLPQ DLPIYYKNFF PVKPFTKWLR YGQNNGDYFN RREFAFILAD DVHIRYRSYN  60
   61 DEHAFFKALS STNPEKLDIG AVYNHEPINN KRHTDYQAVE RELVFDIDLT DYDPVRNCCK 120
  121 DATVCPKCWK FMVLAVKILD FQLEDMFDFK ARMWVFSGRR GVHCWVGDKK ARMLNNYQRS 180
  181 AIATRLNLFK KNGQCEVTEG RAKMTKVPPI VRDAFNVALK DGVFEKMIYD QGWLDKEDFI 240
  241 TEYKFMSEVG RDDLRSLSET YKTPQERWNM IRGLFDDDYR KSLSPKDGLL DFKMQGRDRN 300
  301 YLLYFVLQRC YPRLDVNVST GTNHLLKSPF CIHPKTGNVA VPLNVGKIEE FDVSKCPRID 360
  361 HVVEELSSLL AERGNDENED SKNRKFLAYK HGALAPYVEN FEKFVSACIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..410] PSI-BLAST 64.30103 Crystal structure of DNA primase from Pyrococcus horikoshii


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle