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Protein Overview: ttr-5

General Information:
Name(s) found: ttr-5 / CE00113 [WormBase]
Description(s) found:
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  • WBGene00008040 locus:ttr-5 Transthyretin-like protein 5 status:Confirmed UniProt:Q03575 protein_id:CAA79556.1 [WormBase]
  • gi|465819|sp|Q03575.1|TTR5_CAEEL RecName: Full=Transthyretin-like protein 5; Flags: Precursor [NCBI NR]
  • gi|3874818|emb|CAA79556.1| C. elegans protein C40H1.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • pir||S28300 hypothetical protein C40H1.5 - Caenorhabditis elegans [NCBI NR]
  • gi|17552590|ref|NP_499054.1| TransThyretin-Related family domain family member (ttr-5) [Caenorhabditis elegans] [NCBI NR]
  • Transthyretin-like protein C40H1.5 precursor - Caenorhabditis elegans [Swiss-Prot]
  • Transthyretin-like protein 5 OS=Caenorhabditis elegans GN=ttr-5 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00113 WBGene00008040 Transthyretin-like family status:Partially_confirmed SW:Q03575 protein_id:CAA79556.1 [wormpep150.fasta]
  • 00113 WBGene00008040 Transthyretin-like family status:Partially_confirmed SW:Q03575 protein_id:CAA79556.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • esophageal gland cell secretory protein 11 like precursor family member (3K419) [Caenorhabditis elegans]gi|3874818|emb|CAA79556.1| Hypothetical protein C40H1.5 [Caenorhabditis elegans]gi|280535|pir||S28300 hypothetical protein C40H1.5 - Caenorhabditis e [nrdb_11152004_Chlamydomonas]
  • Transthyretin-like family status:Partially_confirmed SW:Q03575 protein_id:CAA79556.1 [wormpep115.fasta.reversed]
  • CE00113 Transthyretin-like family status:Predicted SW:Q03575 protein_id:CAA79556.1 [wormpep80.hongbin]
  • CE00113 WBGene00008040 locus:ttr-5 Transthyretin-like family status:Partially_confirmed UniProt:YLF5_CAEEL protein_id:CAA79556.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00113 WBGene00008040 locus:ttr-5 Transthyretin-like family status:Partially_confirmed UniProt:YLF5_CAEEL protein_id:CAA79556.1| [wormORF-contam.fasta]
  • Transthyretin-like protein C40H1.5 precursor [nr-271106-contam.fasta]
  • C40H1.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C40H1.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE00113 WBGene00008040 locus:ttr-5 Transthyretin-like family status:Partially_confirmed UniProt:Q03575 protein_id:CAA79556.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00113 WBGene00008040 locus:ttr-5 Transthyretin-like family status:Confirmed UniProt:Q03575 protein_id:CAA79556.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE00113 WBGene00008040 locus:ttr-5 status:Confirmed UniProt:Q03575 protein_id:CAA79556.1 Transthyretin-like protein 5 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 139 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIILLCLV ASSYALIGNT QSAGVRGKLI CNGKPAVGVL VKLYDDDRGI DADDLMASGK  60
   61 TNGNGDFEIS GHEDEVTPID PKLNIYHDCN DGIKPCQRKF TIKIPDSYIN KGKTVRNIYD 120
  121 AGVIQLAGSF PGEGRDCLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] Pfam 72.318759 No description for PF01060.14 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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