YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ttr-5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIILLCLV ASSYALIGNT QSAGVRGKLI CNGKPAVGVL VKLYDDDRGI DADDLMASGK  60
   61 TNGNGDFEIS GHEDEVTPID PKLNIYHDCN DGIKPCQRKF TIKIPDSYIN KGKTVRNIYD 120
  121 AGVIQLAGSF PGEGRDCLH

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	139	0.99