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Protein Overview: SPCC188.09c

General Information:
Name(s) found: SPCC188.09c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • glycoprotein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: external side of cell wall [TASLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: cell adhesion [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLRFFIFT FFTSIFTVVV SEPPVSAKFA KRVLSATSSS SSTCPEFITI FSEGPSEYIT  60
   61 TIYPSSKSSG RGTTNHSTIY TTINSGTVAS TYTVTLADGD VVVKDIEPTA GTVTTTITSG 120
  121 SHEFTTTLAE ASGTVPGTVE VVEPLAGTVT TTIHSGSVEY NTTLATASGT VPGTVEVVEP 180
  181 AVGTVTTTIY SGSEEFTTTL ASASGSISGT VEVIEPTAGT VTTTIYSGDQ EYTTILAEAS 240
  241 GTVPGTVEVI EPAVGTVTTT TYSGSVEYTT TLVPASGSVS GTVEVVEPAV GTVTTTLQSG 300
  301 SQAFTTTVPA SGSVSGTVEV VQPTGGTVTN TVYEGSQTIT STLATASGTV PGTVEVILPG 360
  361 PSTIYSGTVA TTITYDVSST PASTVVVIPT AVCNGERGLQ YAVYNYDISS SKNQFCATSG 420
  421 VTDVSSFTQP AYFGSSDLDQ SSPLFTGVLS SSDSVPQWTS SYNLPGYPPD ATAMGSTSSA 480
  481 CKVIVYQFFF RVPVTDTFSL DVTNVDDVFY GWFGDKAISG WSNTNYDTYA YWHATNGQTG 540
  541 IASFSMGSLT ADTYVPVRFV VANGAGKGGF DFSFVDSEGN SYNPTSYAYT ATCTESFLPF 600
  601 GQGNGGVDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] deduced N/A No confident structure predictions are available.
    2 View Details [134..609] FFAS03 3.86 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.11008558514596 bayes_pls_golite062009
  • protein binding
    		•  1.81988423101674 bayes_pls_golite062009
  • receptor binding
    		•  0.504195144574225 bayes_pls_golite062009
  • receptor activity
    		•  0.357404862871977 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle