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Protein Overview: SPAP8A3.02c

General Information:
Name(s) found: SPAP8A3.02c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • 2 OG-Fe(II) oxygenase superfamily [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: response to hypoxia [IEPLink to PubMed article]
    Molecular Function: iron ion binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYENMSDSF LLSDAGLEFD EALLEVDQEK DDYLDDFENW TVVPVETIEG INYYPNCLPE  60
   61 SVQRNLINNV PKELLSIYGS GKQSHLYIPF PAHINCLNDY IPSDFKQRLW KGQDAEAIIM 120
  121 QVYNPGDGII PHKDLEMFGD GVAIFSFLSN TTMIFTHPEL KLKSKIRLEK GSLLLMSGTA 180
  181 RYDWFHEIPF RAGDWVMNDG EEKWVSRSQR LSVTMRRIIE NHVFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 30.522879 Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602565963316975 bayes_pls_golite062009
  • catalytic activity
    		•  0.154892236593256 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle