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Protein Overview: rsp1

General Information:
Name(s) found: rsp1 / SPBC11B10.05c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • random septum position protein Rsp1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    interphase microtubule organizing center [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    equatorial microtubule organizing center [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed articleLink to PubMed article]
    Biological Process: selection of site for barrier septum formation [IMPLink to PubMed article]
    establishment of nucleus localization [IMPLink to PubMed article]
    establishment or maintenance of cell polarity [IMPLink to PubMed article]
    interphase microtubule organizing center assembly [IMPLink to PubMed article]
    equatorial microtubule organizing center disassembly [IMPLink to PubMed article]
    protein folding [RCALink to PubMed article]
    Molecular Function: Hsp70 protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTAFHDEF VDYYTILGAE STSSYVEIRQ QYLKLVLRYH PDRNPGREAE VLPQFQLIQK  60
   61 AHEVLKDPKL RELFDQRRLL EAGRPDGVLR FRPKKSGPKN DISTKVASKV SVTMATKFAE 120
  121 KKKKQDRENV DSKDNNITNF SLHRSFSASG KMEKNNSFKE VSTSKSYISS GYLHPKTSPI 180
  181 FKKNGYATEN VVDPISSSPR FKGPNYNKFN AKLYLESLRE KRRTYTPLSE ISNGLNSNGV 240
  241 ENSSITKSSP RSSSSSNNER FKDTSEESII FTSPNTPEHP SVYQTDITPE IKLEHSDNNS 300
  301 PSKPEIPFRH PTSKPLPPKP LSRSKSSSLS RNQTRSQLND LSAENDSTSN STEYDDQLQS 360
  361 ILRSLAIEGD DDEVAKVLPK PPSVPTIQAP IPPEAPRNLT NASVDSYLNS FEMYQRRWSS 420
  421 YSIIYTQYAF QWQIFKNKCF QLDLMNTPGQ SRLIDNWKEG SQAIQLFYAY EQMHLRALEE 480
  481 LQSLKESLFA SFGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 27.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [121..317] MSA 1.714996 View MSA. No confident structure predictions are available.
    3 View Details [318..494] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • Hsp70 protein binding
    		•  3.46294021814538 bayes_pls_golite062009
  • binding
    		•  2.0541759325193 bayes_pls_golite062009
  • protein binding
    		•  1.63230390088325 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.4305700213258 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.155856464533709 bayes_pls_golite062009
  • transporter activity
    		•  0.00329162947793138 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle