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Protein Overview: mug186

General Information:
Name(s) found: mug186 / SPBC14F5.11c [Sanger Pombe]
Description(s) found:
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  • pir||T39457 hypothetical protein SPBC14F5.11c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|73621919|sp|O60107.1|SNX41_SCHPO RecName: Full=Sorting nexin-41; AltName: Full=Meiotically up-regulated gene 186 protein [NCBI NR]
  • gi|3184114|emb|CAA19329.1| sorting nexin Snx41 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113529|ref|NP_596737.1| sorting nexin Snx41 [Schizosaccharomyces pombe] [NCBI NR]
  • sorting nexin Snx41 [Sanger Pombe]
  • Sorting nexin-41 OS=Schizosaccharomyces pombe GN=snx41 PE=1 SV=1 [Swiss-Prot]
  • PUTATIVE SORTING NEXIN; BY SIMILARITY: O60107; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||putative sorting nexin [pompepnew.fasta]
  • SPBC14F5.11c protein [4896.FASTAC]
  • |||PX domain|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3184114|emb|CAA19329.1| SPBC14F5.11c [Schizosaccharomyces pombe]gi|7491364|pir||T39457 hypothetical protein SPBC14F5.11c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||PX domain protein|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O60107) Hypothetical protein [pompep4896_normal_reversed]
  • |mug186||sorting nexin Snx41|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC14F5.11c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Sorting nexin-41 [nr-271106-contam.fasta]
  • SPBC14F5.11c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |mug186||sorting nexin Snx41 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Sorting nexin-41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=snx41 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 586 amino acids

    Gene Ontology:
    Cellular Component: endosome [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: retrograde transport, endosome to Golgi [ISSLink to PubMed article]
    Molecular Function: phosphoinositide binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFFEDNNPF SGSDNRSASS AVNVEPKVEP SQHQGSSSVK ENAISQPNES FQSRNMFFQK  60
   61 DVDSVVDSAL DPNGIVITGA MKAESGSHIV YIIKLQDSEI HHRYSEFASL RVQLSRLYPT 120
  121 CLVPPLPDKH KIMDYLINVT KNQRMSRMLE ERKRLLQLFL RRVAQHPILG LSEVFRKFLS 180
  181 RHVSWKEVLH SPPISCLPKD LLKAPPADPS SKENAELYKE LPIPSKTLVP RDNYDDVGKN 240
  241 FLMLEDTLQQ YSIVAQEESN LFNQIVLSNS KYCLAHSTLG AMFNALSLSE SGKLLTALEK 300
  301 VGQANDHTCL ASIDFMHNFV IAVIEPLQEL SKDAKNMRHI FIFRKMKFIQ QVMVEELLTR 360
  361 KKSFLHLLER RERHAARLQQ AIGEVDGDVI LNRESEATLG VNNAQTSRST IPEEDPLFND 420
  421 EESKEPSVPL MGTDQPLENY HDGNGEQTEE CLRDLRHNQS QDFETVSQDT SLTSVTVLPR 480
  481 TIRDVFDRIR FVLNGLTDNN VEVSRHNNIG RTAESVTHLT DMLLITTKDV AFVTDRVNFE 540
  541 FQRYQDTHRQ DLNRILNRLT DSHIDWANRN LRIWNSVQES LKTYVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 14.045757 No description for 2dybA was found.
    2 View Details [289..586] PSI-BLAST 7.69897 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle