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Protein Overview: SPBC18H10.09

General Information:
Name(s) found: SPBC18H10.09 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • zinc finger protein, zf-CHY type [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTAMNKYVE TAFQNQKTTL TSLFNYLLQN WKSFETCNTK ERELMVQQVD SKKPETPTDL  60
   61 EPLANKLEGP LSERVHLNTT LDYEVLRGQN HCQKQNTTQT KTTISGSEQL FNDEKPKKII 120
  121 YSKGGNDGKE DDLQNVNEPQ DAYSNDHDIQ SKDTELLGNE YCLEWKNPHL TNVGTLKAPI 180
  181 LRLVIKCVRC HYGSEISIAT KFSLVCNKCS NTLRLVWVPG VIHPNNARLG ILHTLGCVPV 240
  241 DVMPIDCQVS CMECVDEQIT SFKGISSMQP MLQFCKVCKN RILVEHQDTE FHLLKQRQSS 300
  301 MGGKVSAKKK QKQNLNITKG LPLPNNGACE HYKKSFRWFR FSCCDRVYPC DECHDADQNH 360
  361 TFEHANRIIC GYCAMESFYK KDATCPHCGN MTVKKQTSAY WEGGKGMRDR VRMSRKDPRK 420
  421 YKRKHHGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..319] FFAS03 1.2 Hrs
    2 View Details [320..428] PSI-BLAST 20.69897 No description for 2dktA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.561606449522564 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.19281665757616 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle